Protein

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Genbank accession
NP_835652.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MLQVLKDTYLNSASPHNNYGADEILRLNATSSIALQFENPIGTGYEIRLFVADAWIPHVEYLGGGSYHRLLLTVSLYSFSMDEGYGTEVEPLISQSFNYASLSTLPLPLEVRTVSAFIHLAPLKRRMVSIPLTNFFNAGNFVLIESAEEMAVNFFSRQTRTAFIPYTIPTVSLQPPALSDFVYDTRIDDYGVYLQAWERKIPIAVRGYLMQTLSYIDLSTVWFEVYVFDMITGEEHYYTSLLPTPVGNNWYYIDMSRVNMKRTQYVRLKPVGSTNDIFLSFHNRYLRL
Physico‐chemical
properties
protein length:288 AA
molecular weight: 33065,37040 Da
isoelectric point:5,52045
aromaticity:0,14236
hydropathy:0,00833

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhodothermus phage RM378
[NCBI] 		148943 No lineage information
Host Rhodothermus marinus
[NCBI] 		29549 cellular organisms > Bacteria > Pseudomonadati > FCB group > Bacteroidota/Chlorobiota group > Rhodothermota

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
NP_835652.1 [NCBI]
Genbank nucleotide accession
NC_004735.1 [NCBI]
CDS location
range 52498 -> 53364
strand +
CDS
ATGCTTCAAGTACTGAAAGACACCTATTTAAACAGCGCTTCCCCGCATAACAACTATGGAGCCGACGAAATTCTCCGGCTCAATGCCACTTCCAGCATTGCATTGCAGTTTGAAAACCCGATTGGAACGGGTTATGAGATTCGCCTGTTTGTTGCCGACGCGTGGATTCCCCATGTAGAATATCTGGGTGGGGGAAGCTATCACCGGCTGCTCCTCACCGTTTCGCTCTACAGCTTTTCTATGGATGAAGGATATGGAACCGAAGTAGAACCGCTTATAAGCCAGAGTTTCAACTATGCGTCGCTGTCAACGCTTCCTTTACCACTGGAAGTTCGCACGGTAAGCGCATTTATTCATCTGGCACCGCTCAAGCGGCGTATGGTAAGCATTCCACTTACAAACTTTTTCAACGCCGGAAACTTTGTTCTTATCGAATCGGCTGAGGAAATGGCGGTCAACTTTTTCAGCAGACAGACGCGCACGGCTTTCATTCCCTATACTATTCCGACAGTATCCTTGCAGCCCCCGGCGCTTTCAGACTTCGTATACGATACCCGCATAGACGACTACGGAGTATATCTGCAGGCTTGGGAGCGGAAGATTCCCATTGCGGTAAGGGGTTATCTCATGCAGACGCTGTCATACATAGACCTCTCAACCGTATGGTTTGAAGTATACGTGTTCGACATGATCACCGGTGAGGAACACTATTATACATCGCTGCTTCCCACTCCCGTTGGGAATAACTGGTACTATATTGACATGAGCCGTGTCAATATGAAAAGAACCCAGTATGTGAGACTCAAACCGGTTGGAAGCACCAACGACATTTTCCTTTCCTTCCACAACCGCTATCTGAGACTATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
d06cb07fc3f50585c6b2539284babca5b9a1efd13bd417ae94c7ea2d0f841f59
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4319
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Bacteriophage rm 378 of a thermophilic host organism Hjorleifsdottir,S., Hreggvidsson,G.O., Fridjonsson,O.H., Aevarsson,A. and Kristjansson,J.K. 2013-12-07 — GenBank