Protein

View in Explore
Genbank accession
QXV83447.1 [GenBank]
Protein name
long tail fiber distal hinge connector
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,86
TF
Evidence RBPdetect2
Probability 0,86
Protein sequence
MADLKVGSTTGGSVIWHQGNFPLNPAGDDVLYKSFKIYSEYNKPQAADNDFVSKANGGTYAATVRFNGGVHVPTIGSSQQCGVYPGNGDAATFAMANIDIVSWNGIGFKSSQGSADRTVVINARNGDISTKGVVTAVGQIRSNAVSPVAANDLTRKDYVDGAINTVTANANSRVLRSGDTMTGNLTAPNFFSQNPASQPSHVPRFDQIVIKDSVQDFGYY
Physico‐chemical
properties
protein length:220 AA
molecular weight: 23221,36660 Da
isoelectric point:6,81655
aromaticity:0,09091
hydropathy:-0,27545

Domains

Domains [InterPro]
DC_0466
STR
1–218
DC_0466
IPR005601
STR
56–194
IPR005601
QXV83447.1
1 220
Architecture
STR
STR 1-218 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QXV83447.1
1 220
Domain Start End Length (AA) Confidence
N-terminal 1 196 196 0,2164
Central domain 197 209 14 0,0395
C-terminal 210 220 10 0,9714
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-196
Central
197-209
C-terminal
210-220

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage PaulHMueller
[NCBI] 		2852017 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli K-12
[NCBI] 		83333 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Escherichia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QXV83447.1 [NCBI]
Genbank nucleotide accession
MZ501098 [NCBI]
CDS location
range 59536 -> 60198
strand +
CDS
ATGGCTGATTTAAAAGTAGGTTCAACAACTGGAGGCTCTGTCATTTGGCATCAAGGAAATTTTCCATTGAATCCAGCCGGTGACGATGTACTCTATAAATCATTTAAAATATATTCAGAATACAATAAACCACAAGCAGCTGATAACGATTTCGTTTCTAAAGCTAATGGTGGTACTTACGCCGCGACTGTTCGATTTAATGGAGGCGTACATGTTCCTACTATAGGTAGTAGTCAACAGTGCGGCGTTTATCCAGGCAACGGTGATGCAGCTACTTTTGCTATGGCAAATATTGACATCGTTTCGTGGAATGGTATTGGTTTTAAATCATCACAAGGTTCAGCAGACCGAACTGTTGTAATTAATGCACGTAATGGTGATATTAGTACAAAAGGCGTCGTGACAGCAGTAGGTCAAATAAGAAGTAATGCAGTTTCTCCTGTAGCAGCGAATGACCTAACTCGCAAAGATTATGTTGATGGAGCAATAAATACTGTTACAGCAAATGCGAACTCTAGAGTGTTACGATCTGGCGACACTATGACGGGTAACTTAACCGCACCAAACTTTTTTTCGCAGAATCCTGCATCTCAACCTTCACACGTTCCACGATTTGACCAAATCGTAATTAAGGATTCTGTTCAAGATTTCGGCTATTATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c1cd1769767430d4fbc49c30713b87bf52b07d7dca945f511acd349f3eb2e0f5
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6879
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Systematic exploration of Escherichia coli phage-host interactions with the BASEL phage collection Maffei,E., Shaidullina,A., Burkolter,M., Heyer,Y., Estermann,F., Druelle,V., Sauer,P., Willi,L., Michaelis,S., Hilbi,H., Thaler,D.S. and Harms,A. 2021 — GenBank