Protein

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Genbank accession
AOV57776.1 [GenBank]
Protein name
short tail fiber
RBP type
TSP
Evidence RBPdetect
Probability 0,86
TF
Evidence Phold
Probability 1,00
Protein sequence
MGTSSNFNGTFPSYTGLITLPDLNGRMLMDIENDYFPLTGRAADSDTDARSIMSSIVGSKKQNTQGMALTGSYTDITTDIIFQISPSDRTGYQGKITGNTILAGEGTKTVYVAPRKLGRKHITRHNHPGNVSTIRNDDPRYPGDGVVPYFPISYTLYVSAVDIDSGGDVGDVGDGDLIFFGWTDNNIQGRHTGDPTERSEVGTPVNIRPGIIGGLFGNFQSVNDAPNYPALLSYRWPEQGNNGEESPDGRNDGVPNKVFGLSYSESPPINLKPRELRYTPLTPAFLDTDKHEDAYFIGGPNEQSIPYGAGGNEVNVPVGIRNYFNDTQPENDVSGRTLLSHPAYDFLADAPGTDKIYPHDHGTFDIDFDSTRLKPQSSILANVNLPPSTNPDNTQNEGALSIEFTTAQPKLTCIYIIRAY
Physico‐chemical
properties
protein length:420 AA
molecular weight: 45716,78560 Da
isoelectric point:4,73073
aromaticity:0,09286
hydropathy:-0,54952

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-CAM1
[NCBI] 		754037 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Synechococcus sp. WH 7803
[NCBI] 		32051 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AOV57776.1 [NCBI]
Genbank nucleotide accession
KU686194.1 [NCBI]
CDS location
range 31119 -> 32381
strand +
CDS
ATGGGAACTAGTAGTAATTTCAACGGAACATTCCCATCATATACTGGACTGATTACTCTACCAGATCTAAATGGTAGAATGCTGATGGATATTGAGAATGACTATTTTCCTCTTACTGGAAGAGCGGCGGATAGTGATACTGACGCTAGATCTATTATGAGCTCTATCGTTGGTAGTAAGAAACAGAATACTCAAGGAATGGCACTTACTGGTAGTTATACTGACATCACGACAGACATTATTTTCCAAATTAGTCCAAGCGACAGAACTGGTTATCAAGGAAAAATTACTGGTAATACTATTCTTGCTGGTGAAGGAACAAAGACAGTATATGTTGCTCCTAGAAAACTAGGTAGAAAGCATATTACTAGACATAATCATCCTGGAAACGTCTCGACTATTAGGAATGACGACCCGAGATATCCTGGTGATGGTGTTGTTCCTTACTTTCCAATATCATATACATTATATGTGTCAGCGGTTGACATCGACAGTGGTGGTGATGTTGGTGATGTTGGTGATGGTGACCTTATATTCTTTGGTTGGACTGATAATAATATCCAAGGCAGACATACTGGTGATCCTACAGAAAGAAGTGAAGTTGGAACTCCTGTAAACATTCGACCAGGTATCATTGGTGGTTTGTTTGGAAATTTCCAATCTGTAAACGATGCACCAAATTATCCTGCACTACTTTCTTACAGATGGCCAGAGCAGGGAAATAATGGTGAGGAGAGTCCTGATGGAAGAAATGATGGTGTTCCTAATAAAGTTTTTGGTTTATCGTATTCAGAATCTCCTCCAATTAACCTTAAACCAAGAGAGTTGAGATATACGCCATTGACGCCAGCTTTCCTTGATACAGATAAACACGAGGATGCATACTTTATTGGCGGACCAAATGAACAAAGTATTCCATATGGTGCTGGTGGAAATGAAGTTAATGTTCCAGTGGGAATCAGGAATTACTTTAATGATACTCAACCAGAAAATGACGTTAGCGGCAGAACTTTGTTGAGTCACCCAGCATATGACTTTCTAGCAGATGCACCTGGTACGGATAAAATTTATCCTCATGATCATGGCACATTTGATATTGATTTTGATTCGACCAGATTAAAACCCCAGTCGAGTATTCTTGCTAATGTTAATTTGCCCCCTAGCACAAATCCAGACAATACGCAGAATGAAGGAGCATTATCAATTGAATTCACTACTGCACAACCCAAACTCACCTGTATATACATCATCAGAGCATACTAA

Tertiary structure

PDB ID
6fd5a178c7fef9abaafe410c0ee68ae068c2871de7530399db0fe2c286be9818
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,2810
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50