Protein

View in Explore
Genbank accession
XZO21937.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,71
Protein sequence
MSYKQSAYPNLLMGVSQQVPFERLPGQLSEQINMVSDPVSGLRRRSGIELMAHLHTDQPWPRPFLYHTNLGGRSIAMLVAQHRGELYLFDERDGRLLMGQPLVHDYLKANDYRQLRAATVADDLFIANLSVKPEADRTDIKGVDPNKAGWLYVKAGQYSKAFSLTIKVKDNATGTTYSHTATYVTPDNASTNPNLAEAPFQTSVGYIAWQLYGKFFGAPEYALPNSTKKYPKVDPDPAAATVAGYLNQRGVQDGYIAFRGDGDIVVEVSTDMGNNYGIASGGMSLNATADLPALLPGVGAPGVGVQFMDGAVMATGSTKAPVYFEWDSANRRWAERAAYGTDWVLKKMPLALRWDEATDTYSLNELEYDRRGSGDEDTNPTFNFVTRGITGMTTFQGRLVLLSQEYVCMSASNNPHRWFKKSAAALNDDDPIEIAAQGSLTEPYEHAVTFNKDLIVFAKKYQAVVPGGGIVTPRTAVISITTQYDLDTRAAPAVTGRSVYFAAERALGFMGLHEMAPSPSTDSHYVAEDVTSHIPSYMPGPAEYIQAAASSGYLVFGTSTADEMICHQYLWQGNEKVQNAFHRWTLRHQIIGAYFTGDNLMVLIQKGQEIALGRMHLNSLPAREGLQYPKYDYWRRIEATVDGELELTKQHWDLIKDASAVYQLQPVAGAYMERTHLGVKRETNTKVFLDVPEAVVGAVYVVGCEFWSKVEFTPPVLRDHNGLPMTATRAVLHRYSVNFGWTGEFLWRISDTARPNQPWYDTTPLRLFSRQLNAGEPLVDSAVVPLPARVDMATSKFELSCHSPYDMNVRAVEYNFKSNQIYRRV
Physico‐chemical
properties
protein length:825 AA
molecular weight: 91757,51750 Da
isoelectric point:6,01853
aromaticity:0,10788
hydropathy:-0,31212

Domains

Domains [InterPro]
IPR058003
TTP
1–815
IPR058003
DC_0058
STR
1–825
DC_0058
XZO21937.1
1 825
Architecture
STR
STR 1-825
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XZO21937.1
1 825
Domain Start End Length (AA) Confidence
N-terminal 1 138 138 0,9917
Central domain 139 337 200 0,1759
C-terminal 338 825 487 0,2993
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-138
Central
139-337
C-terminal
338-825

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage 20176-7-1
[NCBI] 		3373967 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa PAO1
[NCBI] 		208964 Bacteria > Proteobacteria > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XZO21937.1 [NCBI]
Genbank nucleotide accession
PQ510354 [NCBI]
CDS location
range 26371 -> 28848
strand +
CDS
ATGAGCTACAAGCAATCCGCGTATCCCAATCTGCTGATGGGTGTGAGCCAGCAGGTGCCCTTCGAGCGCCTGCCGGGCCAGCTCAGCGAGCAGATCAACATGGTATCCGATCCCGTGTCAGGACTTCGGCGGCGCAGCGGTATCGAGCTGATGGCCCACCTGCATACCGACCAGCCCTGGCCGAGGCCGTTCCTCTACCACACGAACCTCGGTGGCCGCAGCATTGCGATGCTGGTGGCGCAGCACCGTGGTGAGCTGTACCTGTTCGACGAGCGGGACGGTCGCCTGCTGATGGGTCAGCCCCTGGTGCATGACTACCTCAAGGCCAACGATTACAGGCAGCTACGGGCCGCCACGGTGGCCGATGACCTGTTCATCGCCAACCTGAGCGTGAAGCCCGAGGCCGACCGCACCGACATCAAGGGCGTAGACCCCAACAAGGCCGGCTGGCTGTACGTCAAGGCAGGCCAGTATTCGAAGGCATTCTCCCTGACCATCAAGGTCAAGGACAACGCCACGGGCACCACCTACAGTCACACGGCCACCTACGTGACACCGGACAACGCCAGCACGAACCCCAACCTCGCTGAGGCACCGTTCCAAACGAGCGTGGGCTACATCGCTTGGCAACTCTACGGCAAGTTCTTCGGCGCCCCGGAGTACGCCCTGCCCAACTCCACGAAGAAGTACCCGAAGGTTGACCCTGACCCGGCTGCGGCTACGGTAGCCGGCTATCTCAACCAGCGGGGCGTGCAGGACGGCTACATCGCCTTCCGGGGCGACGGCGACATCGTGGTCGAGGTGTCCACGGATATGGGCAACAACTACGGCATCGCGTCAGGTGGTATGAGCCTCAATGCTACGGCGGACCTGCCGGCCTTGCTGCCGGGAGTTGGCGCCCCTGGTGTGGGGGTGCAGTTCATGGACGGCGCTGTCATGGCCACCGGCTCCACCAAGGCCCCGGTATACTTCGAGTGGGATTCCGCTAACCGCCGCTGGGCAGAGCGGGCCGCCTACGGCACCGATTGGGTCCTGAAGAAGATGCCACTGGCCCTGCGCTGGGATGAGGCTACCGACACCTACAGCTTGAACGAGTTGGAGTATGATCGACGTGGCTCCGGCGACGAGGATACGAACCCCACGTTCAACTTCGTCACCCGAGGCATCACCGGCATGACGACCTTCCAGGGTCGCCTCGTTCTCCTGTCGCAGGAGTACGTCTGCATGTCGGCCAGTAACAATCCGCACCGCTGGTTCAAGAAGTCGGCAGCCGCGCTGAACGACGATGATCCTATCGAGATCGCGGCCCAGGGGAGCCTGACTGAACCGTACGAGCACGCGGTCACCTTCAACAAGGACTTGATCGTCTTCGCCAAGAAGTACCAGGCCGTGGTCCCCGGTGGCGGCATTGTAACTCCCCGTACGGCGGTTATCAGCATCACCACGCAGTACGACCTCGATACCAGGGCGGCACCTGCCGTGACTGGCCGCAGTGTGTACTTCGCTGCGGAGCGTGCCCTGGGTTTCATGGGCCTGCATGAGATGGCCCCGTCGCCGTCCACGGACAGCCACTACGTCGCCGAGGACGTTACCAGCCACATCCCGAGCTACATGCCGGGGCCGGCTGAGTACATCCAGGCGGCGGCCTCCAGCGGCTACCTGGTGTTCGGCACCAGCACGGCGGACGAGATGATCTGCCACCAGTACCTCTGGCAGGGCAACGAGAAAGTCCAGAACGCCTTCCACCGATGGACGCTGCGGCATCAGATCATCGGCGCGTACTTCACCGGCGACAACCTGATGGTCCTGATCCAGAAGGGCCAGGAGATCGCCCTGGGCCGGATGCACCTGAACAGCCTGCCAGCCCGCGAGGGTCTGCAATATCCGAAGTACGATTACTGGCGGCGTATCGAGGCGACCGTCGATGGTGAGCTGGAGCTGACCAAGCAGCATTGGGACCTGATCAAGGATGCCTCTGCCGTATACCAGCTCCAGCCCGTGGCCGGTGCCTACATGGAACGTACCCACCTCGGCGTGAAGCGCGAGACGAATACGAAGGTGTTCCTCGACGTGCCCGAGGCCGTAGTCGGTGCCGTGTACGTGGTCGGCTGTGAGTTCTGGTCCAAGGTGGAGTTCACTCCGCCGGTGCTACGGGACCACAACGGGCTGCCCATGACCGCGACCCGCGCAGTGCTCCACCGGTACAGCGTGAACTTCGGATGGACTGGCGAGTTCCTGTGGCGCATCAGCGACACGGCTCGACCCAACCAGCCGTGGTACGACACGACGCCCCTTCGGTTGTTCAGCCGGCAACTCAATGCCGGGGAGCCTCTGGTGGATAGCGCTGTGGTGCCGCTGCCGGCACGGGTCGATATGGCCACGTCCAAGTTCGAGCTGAGCTGCCATAGTCCGTACGACATGAACGTCCGGGCTGTCGAGTACAACTTCAAGTCCAACCAAATCTACCGGAGGGTGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
9fcc638ba2e643c22733d3b35daea7a5b6b6b936529cabd03594a6561f8d43df
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8803
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Phage training: Pseudomonas aeruginosa Burke,K.A., A Filippov,A.A., Nikolich,M.P. and Peters,T.L. 2023-12-18 — GenBank