Protein

View in Explore

Genbank accession

AGO49035.1 [GenBank]

Protein name

SGNH hydrolase

RBP type

TSP

Evidence DepoScope

Probability 1,00

TSP

Evidence RBPdetect

Probability 0,74

Evidence RBPdetect2

Probability 0,80

Protein sequence

MAITIQIRRDTAANWTLNNPILAQGEQALELDTRKEKLGDGVTRWNDLDYRLIQEGAKGEDGEDGKSAFDIALENGFVGTEAEWLISLKGSDGLVGEKGEKGDVGEKGDVGEKGEKGDVGATGADGIQGEKGDIGPTGLTGAKGDIGLTGAQGEKGDQGDVGEKGEKGDIGLTGAQGDQGIQGIQGEKGEKGDQGESVPQTIDDGSIVEAKLEDLVVNKINDAVSSKLDSEPTKTSKISNLVNVNEFNYQVALNRQELVEGTSYVQTEIEDDVLNIDVVNSTFVNLLEPYDYISESHMIRDSIFDYDARGGWEYRGSETTAIPVSWSKPTTTNVFGSGYNATVWGAAFTVKGDFAVRVAGSDDSMARQRIFINGKPYLFENKNGLPDGGTRRWAVFQMKKGKTYEIKVEFSQAGSFYGFKTEVGGFVEALKPKETVFFFGDSITASTGASKGGYGYSHMIFTGKNTNVLSSGIGGTGYVNNLSGTQYNLPERIVKNYNDVVAESGIPDKVVIAMGVNDLGLTGILDGMNNSFDLLRTVYDGEVFVLNSFNPSAPTISTAYQSFTDDLISAIGDREGFTFVDISELSYSKFDTVHPDDEGHATIAEFLYPYLVDESKYLDTKIITSEEIEDLPISKIAGLEDALIDVVKDKPVSVIKNLHKTSDPTSLINESNIINAWSKNNTSLTLSSDNTDSVRGALSLKASKTVAGSAVFYTPNYTVELGKEYIFTCKVKVGGGFITGSTMYSSEKSGAFVQTPIDHTITEWQTLTQTLSFSKERTRFTFSMSVQEVGAFLLVDDIEFYEVSDTIKAFPNAEGFGAISTGGRTGTVKFVTNLNDSGAGSLREACSTSFSYIVFLIAGTIELDSPIFVESNVSIYGQTAFRNGGQGITLRASSTNEASLMVFNSGNENLVIQYIRFRRGMTPFVTSATAGQTLALTGDASKIIVDHCSFGWDEDESLTIWGVLDVTVSNSTITNSLKVNQYGREKTSKSLIIGNGSDRVSIYTTLIGNADQRNALFGGSTLPIESFEFKNNLIFNWGNIGTDFLGGQLPLKVNIIGNKWKIGNNSILNRHGLRATGNTGDKFYLKGNINLNRPTDDLDEWLAIGDSATPSANLSTTFQELTPFDFPLENAKTYSIEELEGEVLNQMGASLYVDKPDRLSKRDYLDGTGSHINNQEDVGGFPTLSDLTSPIIDPLNIGIDEEFANAHGITSSNQIKLSYDFGTWIFDNSLGYEAIEVYAYWLTKN

Physico‐chemical properties

protein length:	1245 AA
molecular weight:	134817,94840 Da
isoelectric point:	4,56004
aromaticity:	0,09317
hydropathy:	-0,29679

Domains

Domains [InterPro]

DC_0435
ATT
1–62

DC_0435 DC_0723 DC_1016 IPR036514 DC_2200 G3DSA:2.60.120.260 IPR012334

SSF69349
STR
4–194

SSF69349 SSF52266 IPR008979 IPR052063

IPR041352
ATT
5–43

IPR041352 IPR008160 cd00229 IPR011050

IPR013830
ENZ
438–601

IPR013830

AGO49035.1

1 1245

Architecture

ATT

STR

ATT

STR

ATT 1-62 | STR 63-187 | ATT 188-426 | STR 427-1152 |

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
DC_0435	ATT	DC_0435	1	62	Novel HMM	DC_0435	N-terminal	Low	Positional only	79 proteins / 79 hits
SSF69349	STR	SSF69349	4	194	Merged direct domain	SSF69349	Central	Low	Positional only	153 proteins / 153 hits
IPR041352	ATT	DC_0533	5	43	InterPro cluster	Major tropism determinant, N-terminal domain	Central	Medium	Text match	295 proteins / 296 hits
DC_0723	STR	DC_0723	119	171	Novel HMM	DC_0723	Central	Low	Positional only	9 proteins / 9 hits
IPR008160	STR	DC_0536	135	193	InterPro cluster	Collagen triple helix repeat	C-terminal	High	Text match	355 proteins / 386 hits
DC_1016	ATT	DC_1016	188	426	Novel HMM	DC_1016	N-terminal	Low	Positional only	8 proteins / 8 hits
IPR036514	STR	IPR036514	426	616	Merged direct domain	SGNH hydrolase superfamily	Central	Low	Positional only	180 proteins / 180 hits
SSF52266	STR	SSF52266	432	611	Merged direct domain	SSF52266	Central	Low	Positional only	227 proteins / 227 hits
cd00229	ENZ	DC_0001	436	610	InterPro cluster	cd00229	C-terminal	High	Text match	480 proteins / 783 hits
IPR013830	ENZ	DC_0001	438	601	InterPro cluster	SGNH hydrolase-type esterase domain	C-terminal	High	Text match	480 proteins / 783 hits
DC_2200	STR	DC_2200	617	668	Novel HMM	DC_2200	Central	Low	Positional only	3 proteins / 3 hits
G3DSA:2.60.120.260	STR	G3DSA:2.60.120.260	669	801	Merged direct domain	G3DSA:2.60.120.260	Central	Low	Positional only	264 proteins / 264 hits
IPR008979	STR	IPR008979	670	803	Merged direct domain	Galactose-binding-like domain superfamily	Central	Low	Positional only	24 proteins / 24 hits
IPR012334	STR	IPR012334	802	1110	Merged direct domain	Pectin lyase fold	Central	Low	Positional only	867 proteins / 867 hits
IPR052063	Unmapped	-	803	1240	InterPro	Polysaccharide Lyase 1	-	-	-	-
IPR011050	STR	IPR011050	810	1152	Merged direct domain	Pectin lyase fold/virulence factor	Central	Low	Positional only	572 proteins / 572 hits

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout

N-terminal

Central

C-terminal

AGO49035.1

1 1245

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	290	290	0,9954
Central domain	291	489	200	0,6657
C-terminal	490	1245	755	0,1891

Legend: N-terminal Central domain C-terminal

3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring

N-terminal
1-290

Central
291-489

C-terminal
490-1245

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Cellulophaga phage phi13:1 [NCBI]	1327992	Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host	Cellulophaga baltica [NCBI]	76594	cellular organisms > Bacteria > Pseudomonadati > FCB group > Bacteroidota/Chlorobiota group > Bacteroidota

Coding sequence (CDS)

Genbank protein accession

AGO49035.1 [NCBI]

Genbank nucleotide accession

KC821625 [NCBI]

CDS location

range 20439 -> 24176
strand +

CDS

ATGGCAATTACAATACAAATTAGAAGAGATACTGCAGCAAATTGGACATTAAATAATCCTATTTTAGCTCAAGGTGAACAAGCGTTAGAACTTGATACTCGAAAAGAAAAATTGGGTGATGGCGTTACTCGTTGGAATGATCTAGATTATAGATTGATTCAAGAAGGAGCAAAAGGTGAAGATGGTGAAGATGGAAAATCTGCTTTTGATATAGCTTTAGAAAATGGCTTTGTTGGAACTGAAGCAGAATGGCTAATTTCTTTAAAAGGTTCTGATGGATTAGTTGGCGAAAAAGGAGAAAAAGGCGATGTTGGTGAAAAAGGAGATGTTGGTGAAAAAGGTGAAAAAGGTGATGTTGGAGCGACTGGAGCTGACGGAATCCAAGGTGAAAAAGGTGATATTGGACCTACTGGATTAACTGGAGCAAAAGGAGATATTGGATTGACGGGAGCACAAGGTGAAAAAGGCGATCAAGGTGATGTTGGCGAAAAAGGTGAAAAAGGTGATATCGGATTAACAGGAGCACAAGGTGATCAAGGAATCCAAGGAATTCAAGGCGAAAAAGGAGAAAAAGGTGATCAAGGCGAATCAGTTCCTCAAACTATAGATGATGGAAGTATTGTTGAAGCTAAGTTAGAAGATCTTGTAGTCAATAAAATAAATGATGCTGTTTCAAGTAAATTAGATTCAGAACCTACAAAAACCAGCAAAATATCTAATCTAGTAAATGTTAATGAATTTAATTATCAAGTTGCATTAAATAGACAAGAATTAGTCGAAGGAACATCTTACGTACAAACAGAAATTGAAGACGATGTTTTAAATATTGATGTTGTAAATAGTACGTTTGTAAATCTATTAGAGCCATACGATTATATTTCTGAATCACATATGATTCGTGATAGTATTTTTGATTATGATGCAAGAGGTGGTTGGGAATATAGAGGCTCAGAAACAACAGCGATTCCAGTATCTTGGTCAAAACCAACTACAACAAATGTTTTTGGATCAGGATATAATGCTACAGTATGGGGAGCAGCTTTTACAGTAAAAGGTGATTTTGCCGTTAGAGTTGCAGGCTCTGACGATAGTATGGCTAGACAAAGAATTTTTATCAACGGAAAACCATATCTTTTTGAAAATAAAAATGGTTTGCCTGATGGTGGAACTAGAAGATGGGCTGTTTTTCAAATGAAAAAAGGTAAAACTTATGAAATTAAAGTAGAGTTTTCGCAAGCAGGTTCATTTTATGGATTCAAGACTGAAGTTGGAGGATTCGTTGAAGCATTAAAGCCAAAAGAAACAGTATTCTTTTTCGGTGATAGTATTACAGCATCTACAGGAGCATCTAAGGGTGGTTATGGATATTCGCATATGATTTTTACAGGTAAAAATACAAACGTTTTATCTTCTGGAATTGGTGGAACTGGTTATGTTAATAATTTGAGTGGAACTCAATATAACTTACCTGAAAGGATTGTTAAAAATTATAATGATGTAGTTGCTGAATCAGGAATACCAGATAAGGTTGTTATTGCGATGGGTGTGAATGATTTAGGTTTGACGGGAATATTAGATGGAATGAATAATTCTTTCGATTTACTTAGAACTGTTTATGATGGCGAAGTGTTTGTTTTAAATTCATTTAATCCAAGCGCTCCAACAATATCAACAGCTTACCAAAGTTTTACAGATGATCTTATCAGCGCAATTGGTGATAGAGAAGGATTCACTTTTGTAGATATATCAGAACTTTCTTATTCGAAATTTGATACAGTTCATCCAGATGATGAAGGGCATGCAACTATAGCAGAATTTTTATATCCATATTTGGTTGATGAATCAAAATATTTAGATACAAAAATCATTACATCTGAAGAAATTGAAGATTTGCCTATTTCTAAAATTGCAGGTCTTGAGGATGCATTGATAGATGTAGTAAAAGATAAGCCCGTAAGTGTAATAAAAAACTTACATAAAACATCTGATCCAACTAGCTTAATAAATGAATCAAATATAATTAATGCTTGGTCTAAAAATAATACAAGTTTAACTTTAAGTTCTGATAATACTGATAGTGTTAGAGGAGCATTAAGTTTAAAAGCTTCCAAGACAGTTGCGGGTTCAGCAGTATTTTATACTCCTAACTATACAGTTGAATTAGGTAAGGAATACATATTCACTTGTAAAGTAAAAGTAGGTGGAGGTTTTATCACAGGAAGTACTATGTATTCTTCTGAAAAATCAGGAGCGTTTGTGCAAACACCTATAGATCATACTATTACTGAATGGCAAACATTAACTCAAACATTAAGTTTTTCAAAAGAAAGAACTAGATTTACATTTAGTATGTCAGTACAAGAAGTAGGTGCTTTTCTATTAGTTGATGATATTGAATTTTATGAAGTATCAGATACTATAAAAGCATTTCCAAATGCAGAAGGATTTGGAGCAATATCTACAGGAGGTAGAACTGGTACAGTTAAATTTGTGACAAACTTAAATGACAGTGGAGCAGGCAGTTTAAGAGAAGCTTGCAGTACATCTTTTTCTTATATTGTGTTTTTGATTGCAGGAACAATAGAGCTAGATTCACCTATATTTGTTGAAAGTAATGTTAGTATTTATGGCCAAACAGCATTTAGAAATGGAGGACAAGGCATAACTCTTAGAGCTTCTAGCACTAATGAAGCTAGTTTAATGGTGTTTAATTCAGGAAATGAAAACTTGGTTATACAATACATTAGATTTAGAAGAGGTATGACGCCTTTTGTAACTTCTGCGACAGCAGGTCAAACATTAGCTTTAACGGGAGATGCATCTAAAATTATAGTAGATCATTGTTCTTTTGGATGGGATGAAGATGAAAGTCTTACTATTTGGGGAGTGTTAGATGTAACAGTATCTAATTCTACTATAACTAACTCTCTTAAAGTGAACCAGTATGGAAGAGAAAAAACTAGTAAAAGTTTAATTATAGGTAATGGTTCAGATAGAGTATCTATTTATACCACACTTATAGGAAATGCTGATCAAAGAAATGCTTTATTTGGAGGATCAACTTTACCAATTGAATCATTTGAATTTAAGAACAATCTTATTTTCAACTGGGGTAATATTGGTACAGATTTTCTTGGAGGTCAATTACCACTTAAAGTTAATATTATAGGAAACAAATGGAAGATAGGTAATAATTCTATTTTAAATAGACATGGTTTAAGAGCTACAGGAAATACTGGGGATAAGTTCTATCTTAAAGGCAATATAAATCTAAATAGACCTACAGATGATTTAGATGAATGGTTAGCTATCGGAGATTCTGCTACACCTTCAGCTAATTTATCAACTACATTTCAAGAACTTACACCTTTTGATTTTCCATTAGAGAATGCGAAAACATATTCTATAGAAGAATTAGAAGGAGAAGTACTTAATCAAATGGGAGCTAGTTTATATGTAGATAAACCAGATAGATTATCTAAAAGAGATTACTTAGATGGTACGGGTTCTCATATTAACAACCAAGAAGATGTAGGTGGATTTCCAACATTATCAGATTTAACGTCTCCAATAATAGATCCATTGAATATAGGTATAGATGAAGAATTTGCTAATGCTCATGGCATAACATCTTCTAATCAAATAAAATTATCATATGATTTTGGAACGTGGATATTTGATAATTCGCTAGGGTATGAAGCTATAGAAGTTTATGCTTACTGGTTAACTAAAAATTAA

Genome Context

Tertiary structure

PDB ID

38891beca8baac1b16f077704d6e2b59c1fa1b92acb79e6d0a3f2d388a279f91

ESMFold

Source ESMFold

Method ESMFold

Resolution 0,6155

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

3D Structure with Domain Coloring

Domain Coloring

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence