Protein

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Genbank accession
QJB22083.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
Protein sequence
MFKAWHPPSSLEYLGSFDMAKSILSALSSKPSTSFINENTGVPCWTAARIVDVSIISDSDNANSPLSNQQLNEASVSSELLSEDVKTAKILRPSRLRVTIITDNISLIENVLGLFADVTVTISITSKSIVANSMSITDVEVDQSSEMLSASKVIVTLEQVIVASGSRFNPAQDSDSDNYGLGVQSPSRVGASLSTAATSAGSLLSSAGTAVTSLYNRIKNQIGV
Physico‐chemical
properties
protein length:224 AA
molecular weight: 23577,20980 Da
isoelectric point:4,74989
aromaticity:0,04464
hydropathy:0,10402

Domains

Domains [InterPro]
IPR054442
ATT
20–219
IPR054442
IPR054442
ATT
22–219
IPR054442
QJB22083.1
1 224
Architecture
ATT
ATT 20-219 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Xanthomonas phage FoX6
[NCBI] 		2723902 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Xanthomonas campestris pv. campestris
[NCBI] 		340 Bacteria > Proteobacteria > Gammaproteobacteria > Xanthomonadales > Xanthomonadaceae > Xanthomonas

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QJB22083.1 [NCBI]
Genbank nucleotide accession
MT161386.1 [NCBI]
CDS location
range 17414 -> 18088
strand +
CDS
ATGTTCAAGGCTTGGCATCCTCCTTCAAGTCTAGAATATCTGGGTTCTTTTGATATGGCGAAGTCGATCCTATCTGCACTCTCCAGCAAACCATCAACAAGTTTCATCAATGAAAATACCGGAGTTCCTTGTTGGACTGCCGCGCGAATCGTTGATGTCTCGATAATCTCTGATTCCGATAATGCGAATTCGCCTCTTTCAAACCAGCAGTTGAATGAGGCGAGCGTAAGCAGTGAATTGTTATCCGAAGATGTGAAGACCGCGAAGATATTGCGGCCTTCTAGGCTTCGTGTGACTATCATAACAGACAATATATCTCTGATAGAAAACGTGCTCGGCCTTTTTGCCGACGTTACGGTTACAATATCCATAACATCCAAGTCCATAGTTGCCAACTCCATGTCGATAACTGATGTGGAAGTCGATCAATCATCTGAAATGCTTTCCGCGTCAAAGGTGATAGTTACTCTTGAGCAAGTAATAGTCGCATCAGGCTCTAGATTCAATCCTGCGCAAGACTCAGATAGCGACAACTATGGGCTTGGAGTTCAGTCGCCAAGTAGGGTTGGGGCGTCACTTAGCACGGCCGCGACTAGTGCCGGAAGTCTGCTGTCAAGCGCAGGCACGGCAGTTACATCACTATACAATCGAATCAAAAATCAAATAGGGGTCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
b9c52338f314f4cf5a3b863c7662f5a550c34102d9c2a0f5e15fa105a897d4c0
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7332
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Development of an integrated pest management strategy to control Xanthomonas campestris pv. campestris by using bacteriophages Fortuna,K.J., Holtappels,D., Lavigne,R. and Wagemans,J. 2022-01-27 — GenBank