Protein

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UniProt accession
A0A976R8D2 [UniProt]
Protein name
Major capsid protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MSIFNTVNLPKPFRSKYNLTHERKLSCQMGRLIPFFCEEVLPDDKWSVQSAFRLELAPLIAPLMHNVDVYQYFFYVPNYLLSSAWNTWISQGEPADSPNIPYPCRFILSDDQFRGLDADNLKLFVGPGTLLDYLGFSNENARTGKGYDSSVKGVDLKDYSCFPFLAYNGIWLNYFRNENFEPLPTEWGNPGGYVQGLDQTQNINLSDWKAWNFYYRNNVVAPIIYYLNPLDDDDFGGASGDAINTSRFLPHIKPRKANFMHDYFTSALPFTQRGPVVKIPLGETAKVVGTAQVNGVIDIDKPVLSSSSSSGLSFVTEGTTVRNKEVLNFYNSSGSTANIVGDGHLDNPITGISGNNMNGIAAANVDTSNLEVDLSEATGISILDLRRFAKLQSWLEKNAIGGNTPGENIRNHFGVRPSDQSLDKPIFLGGGRVPIDISNVLQTSQSTDTSALATPSGYARANGYAGFRNRYFREHGWILGLLYVMPRSTYMQGTRRYWDRKSRFDYFWMEFERIGEQPVYGYEIYDDGLASDENNGEFGYNPRYSDYKYIPSSVHGDFKTSLSFWHAARIFSERPKLNSSFLHLGDDINRIFAVDESVSDQKCWFWIRNTVKVRRPMLKNPTSILG
Physico‐chemical
properties
protein length:626 AA
molecular weight: 70733,43380 Da
isoelectric point:5,88076
aromaticity:0,13419
hydropathy:-0,39425

Domains

Domains [InterPro]
IPR037002
ATT
10–239
IPR037002 IPR037002
IPR003514
STR
14–620
IPR003514
IPR016184
Unmapped
14–554
IPR016184
A0A976R8D2
1 626
Architecture
ATT
STR
ATT
ATT 10-239 | STR 240-329 | ATT 330-626
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
A0A976R8D2
1 626
Domain Start End Length (AA) Confidence
N-terminal 1 310 310 0,9180
Central domain 311 509 200 0,1303
C-terminal 510 626 116 0,7174
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-310
Central
311-509
C-terminal
510-626

Taxonomy

  Name Taxonomy ID Lineage
Phage Dipodfec virus RodF1_68
[NCBI] 		2929308 Viruses > Monodnaviria > Sangervirae > Phixviricota > Malgrandaviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Genome Context

Genome Context

Gene Ontology

Description Category Evidence (source)
GO:0039615 T=1 icosahedral viral capsid Cellular Component IEA:UniProtKB-KW (UniProt)
GO:0005198 structural molecule activity Molecular Function IEA:InterPro (UniProt)

Tertiary structure

PDB ID
13ba8b9e3404ce1d86fafbc3b6c191510039cdbb2d99a46330f208db80c0ef7f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5292
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50