Protein

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Genbank accession
YP_453655.1 [GenBank]
Protein name
putative tail fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,81
Protein sequence
MADLPEQPAGWPGIPMISTSDPVLGGQDGPANRQAAALISRLQTVRDLVDAATAALATVTPQVDQHVQTINALQASVSSVQTSVQTVSGVATAAQTAASVADAKAVAAQTAATARAVRIDLGTVTVTYTASTALVAGARSIAVACTGAQVGDAIFVAATNAIPDGYAVGAAQCLVADTIRVSVIYPALSIGNSFSISLRVFALR
Physico‐chemical
properties
protein length:204 AA
molecular weight: 20385,88260 Da
isoelectric point:5,09274
aromaticity:0,03431
hydropathy:0,49510

Domains

Domains [InterPro]
DC_1388
STR
1–202
DC_1388
YP_453655.1
1 204
Architecture
STR
STR 1-202 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Xanthomonas phage OP2
[NCBI] 		331627 Uroviricota > Caudoviricetes > Kantovirinae > Tsukubavirus OP2 >
Host Xanthomonas oryzae
[NCBI] 		347 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Lysobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_453655.1 [NCBI]
Genbank nucleotide accession
NC_007710 [NCBI]
CDS location
range 28160 -> 28774
strand -
CDS
ATGGCCGATCTGCCCGAACAACCTGCCGGCTGGCCCGGTATCCCGATGATATCGACGTCCGACCCGGTCCTAGGCGGTCAAGACGGCCCCGCCAATCGACAAGCTGCGGCGCTGATCTCGCGCTTACAGACGGTACGCGATCTCGTCGACGCAGCCACCGCCGCGCTCGCAACGGTGACCCCGCAGGTCGACCAGCACGTCCAGACGATCAACGCGCTGCAAGCCTCTGTCAGTTCCGTACAGACGTCCGTGCAGACGGTCAGTGGGGTTGCCACGGCGGCTCAGACCGCGGCCTCTGTGGCCGACGCTAAGGCCGTTGCCGCGCAAACGGCAGCCACGGCAAGGGCGGTGCGCATCGACCTGGGAACTGTCACGGTCACTTATACTGCAAGCACCGCACTGGTGGCCGGCGCACGTTCGATTGCGGTGGCGTGCACCGGGGCTCAGGTCGGCGACGCGATCTTCGTTGCGGCGACCAACGCGATACCGGACGGCTACGCGGTCGGCGCGGCGCAATGTCTGGTCGCCGACACGATCCGCGTATCGGTGATCTACCCTGCGCTGAGCATCGGCAATAGCTTCAGCATCTCCTTGCGTGTCTTCGCGCTGCGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
6bccbb5c0d295af6dc51b0f7119e57065703f0adff79ba905e7a21d6565d6de9
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8662
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Sequence analysis of the genome of OP2, a lytic bacteriophage of Xanthomonas oryzae pv. oryzae Inoue,Y., Matsuura,T., Ohara,T. and Azegami,K. 2006 — GenBank