Protein

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Genbank accession
ASD51730.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MKTIVITLLLSISTYSQVGIATTTPTETLDVNGTARVRNLTDGTIQTNSTGVLSIMPNMNSVFDESVENGEVKKFVRSNQIYVFE
Physico‐chemical
properties
protein length:85 AA
molecular weight: 9301,45370 Da
isoelectric point:4,92495
aromaticity:0,05882
hydropathy:0,02941

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Flavobacterium phage FCV-11
[NCBI] 		1983585 Uroviricota > Caudoviricetes > Ficleduovirus >
Host Flavobacterium columnare
[NCBI] 		996 cellular organisms > Bacteria > Pseudomonadati > FCB group > Bacteroidota/Chlorobiota group > Bacteroidota

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ASD51730.1 [NCBI]
Genbank nucleotide accession
KY951964.1 [NCBI]
CDS location
range 46070 -> 46327
strand +
CDS
ATGAAAACAATTGTTATCACATTATTATTATCAATATCAACTTATTCTCAAGTTGGTATTGCAACAACAACACCAACTGAAACTTTAGATGTAAACGGAACGGCAAGAGTTCGAAATTTGACAGATGGAACAATTCAAACAAACTCAACAGGTGTTTTATCAATTATGCCTAACATGAATAGTGTGTTTGATGAAAGCGTAGAGAATGGAGAGGTAAAGAAGTTCGTAAGAAGTAATCAGATATACGTATTTGAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
4e05cd1f0b6c191e8da409795224f04a30b9dda65e7c81f802b3b693e858f4de
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7334
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Long-term genomic coevolution of host-parasite interaction in the natural environment Laanto,E., Hoikkala,V., Ravantti,J. and Sundberg,L.-R. — — GenBank