Protein

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Genbank accession
WNO48467.1 [GenBank]
Protein name
putative collar
RBP type
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MADIIYRLVKGEPLTNQEMDNNLRELDENRVKTSLLGETSGEGIPVMENGVIKEENLPPIPSGPPVASIAWWPLRSSIPAGQIPADGQTISRATFPDLAAMVVARTVPVATESDWLADPRNRGCYTAGDGSTTIRVPDLNGRSSGTLGRIFLSGDGADSNGVWGVIQRDQFQKHHHYINLKTASGAADVYGTSPYGSGTGSQYSTWGEAIQFNPQVGPPRSGDKTHPQNVAGVWTVQAFGAVTNPGSADAAQLASD
Physico‐chemical
properties
protein length:256 AA
molecular weight: 27125,73470 Da
isoelectric point:4,98946
aromaticity:0,06641
hydropathy:-0,39062

Domains

Domains [InterPro]
SSF88874
58–239
SSF88874
IPR037053
64–144
IPR037053
WNO48467.1
1 256
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Achromobacter phage SE2
[NCBI] 		3043584 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WNO48467.1 [NCBI]
Genbank nucleotide accession
OQ817844 [NCBI]
CDS location
range 13635 -> 14405
strand +
CDS
ATGGCAGACATCATCTACCGGTTGGTAAAAGGTGAGCCCCTTACCAACCAGGAAATGGACAACAACCTGCGCGAGCTCGACGAGAACCGCGTAAAGACTTCGCTACTAGGTGAAACTAGCGGCGAAGGTATTCCAGTTATGGAAAACGGAGTAATCAAGGAAGAAAATCTTCCGCCTATTCCGTCTGGCCCGCCAGTGGCTTCCATCGCCTGGTGGCCGCTGCGCTCGTCCATCCCCGCGGGGCAGATCCCTGCGGACGGTCAGACGATCTCGCGCGCCACCTTTCCCGACCTCGCGGCCATGGTGGTGGCCAGAACGGTGCCCGTGGCCACGGAATCCGATTGGTTGGCAGACCCGCGCAATCGCGGCTGTTATACCGCCGGCGACGGTTCGACCACCATTCGGGTGCCCGACCTGAACGGCCGATCCTCGGGCACTCTCGGACGCATTTTCCTCTCGGGTGATGGTGCGGATTCTAATGGTGTTTGGGGCGTCATTCAGCGGGACCAGTTCCAGAAGCACCACCACTACATCAACCTCAAAACCGCCAGCGGTGCCGCCGACGTATACGGCACTTCTCCTTACGGTAGCGGCACCGGGTCACAGTATTCGACCTGGGGGGAGGCCATCCAATTCAACCCGCAAGTTGGCCCCCCGAGATCGGGCGACAAAACTCACCCCCAGAACGTCGCGGGGGTTTGGACCGTCCAGGCTTTCGGTGCCGTCACCAACCCTGGTAGTGCTGACGCTGCCCAGCTTGCCAGCGACTAG

Tertiary structure

PDB ID
1426c163c831ed80ef1ac4255fc4be8ac023b1b42038d31db2784c24d050e66e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7259
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Compounding Achromophages for therapeutic applications Cobian-Guemes,A.G., Le,T., Rojas,M.I., Villela,H., McNair,K., Hung,S.-H., Han,L., Boling,L., Octavio,J.C., Dominguez,L., Cantu,V.A., Archdeacon,S., Vega,A.A., Jacobson,N., An,M., Hajama,H., Burkeen,G., Edwards,R.A., Conrad,D., Rohwer,F. and Segall,A.M. 2006 — GenBank