Protein

View in Explore
Genbank accession
XPO96674.1 [GenBank]
Protein name
tail protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,88
TF
Evidence RBPdetect2
Probability 0,80
Protein sequence
MALILHYTRNEDGTFGRKRSNVPPMEYVVANIPDGVPVRIYRGEIGEDTEVTEDFEALKEDDVFHIIEGAGGGGGFLGKLLDPLGVLKFVTKLISPSQKTPKTSLANQQAESPNNSLTDRNNKPRPYERSYDICGRVQTIPNDLMTTYKVFNTAGRVIEYGYYDAGRGYLDIKAEDITDGDTKVQEITGTSVAVYAPFTSPNNTNAPQLLVGDPINQGLFITIASNEVDGAVLKAPNDLANNVGSSARARLVGTTGTITDPTGDSAFNTYIAPGDQATFTWIRPEGHGNLDGVYTVLSVDEFQITVDASPKLSEWQTLPDRGGGVREGYVTQDKAATIGPTDTYDASLTDWVSLNRIKVGRVVANFAAANGMYKDDGNKQGTSVTVEVQYQLIGDDGAPYGPVYNKRGTISGRTSDYTGVTVFADLPTESRVRVRCRRVSNFDFDFGGTVVDEVSYINLYGQVRDTTPHYGNRTTVHSARKQTPRAAEIKQPQLRMVATEMVYKYLGNGVFDTVMTPNTQAVQSLIRLARDPVVGNLNLTTSNMDKLLATQTEIENYFGNAEAGQFCYTFDEYKMTMQDIISTIADAIFCTPYRKGQDILLDFERPRMGPEMVFTHRSKTTASEKWTRTFNDAQVYDSLKFSYIDPDTNVKETISIPAEGGVNTETYDSKGIRNYRQAYWAAYRRYQKNLLKKVTVSFTATEEGVFVLPGRAISVVKGSRVAPQDGYIVAVNGLALTLSQPVTFTPGDDHSLILKKRDGGVQSVAVVPGSHDREVIMLSAPQEAIYTGNSALKTEFSFGNEARHNAQMILVSTVDPGDDRTVKITGINYEADFYKYDGVAPFGRGFSDGFSNGFS
Physico‐chemical
properties
protein length:855 AA
molecular weight: 93849,70880 Da
isoelectric point:5,20335
aromaticity:0,09474
hydropathy:-0,39123

Domains

Domains [InterPro]
DC_0118
STR
1–688
DC_0118 DC_0808
NF040662
Unmapped
361–835
NF040662
XPO96674.1
1 855
Architecture
STR
RBD
STR 1-688 | RBD 707-848 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XPO96674.1
1 855
Domain Start End Length (AA) Confidence
N-terminal 1 232 232 0,9930
Central domain 233 431 200 0,3608
C-terminal 432 855 423 0,1400
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-232
Central
233-431
C-terminal
432-855

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage EM1
[NCBI] 		3385242 Viruses >
Host Escherichia marmotae
[NCBI] 		1499973 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XPO96674.1 [NCBI]
Genbank nucleotide accession
PQ571293.1 [NCBI]
CDS location
range 26450 -> 29017
strand +
CDS
TTGGCGCTGATATTACATTACACCCGTAACGAAGATGGTACTTTCGGCCGCAAACGGAGCAACGTACCGCCGATGGAATACGTCGTCGCTAACATCCCCGACGGCGTACCAGTGCGCATTTACCGCGGCGAAATAGGCGAAGATACAGAAGTCACCGAAGACTTCGAAGCGCTGAAAGAAGATGACGTTTTCCATATTATCGAAGGTGCGGGCGGTGGTGGCGGTTTTCTGGGTAAACTCCTGGACCCATTGGGCGTGCTTAAGTTTGTCACTAAGCTGATTTCACCGTCGCAGAAAACGCCTAAAACTAGTTTAGCCAACCAACAGGCTGAGTCGCCAAACAACAGCCTGACGGACCGAAACAATAAACCACGCCCATATGAACGGTCGTATGACATTTGCGGCAGGGTCCAGACTATCCCTAATGACCTCATGACCACGTATAAGGTATTTAATACCGCCGGTCGCGTTATTGAGTACGGGTACTATGATGCGGGTCGCGGTTACCTTGATATCAAAGCAGAAGATATTACCGACGGGGACACTAAAGTACAGGAGATTACCGGGACCTCCGTTGCCGTGTACGCGCCCTTCACTTCGCCCAACAACACGAATGCTCCGCAGTTGTTGGTTGGTGACCCCATAAACCAGGGGTTATTCATAACTATAGCATCCAATGAAGTAGACGGCGCCGTTTTAAAAGCACCAAACGACCTCGCTAACAACGTGGGCAGCTCGGCCCGCGCCCGTCTTGTCGGCACCACGGGGACAATAACCGACCCAACGGGGGATTCGGCATTCAATACCTACATTGCCCCGGGAGACCAGGCCACTTTTACGTGGATACGCCCAGAAGGACATGGCAATCTTGATGGCGTCTACACGGTATTAAGTGTGGACGAGTTCCAGATAACGGTTGACGCCTCCCCAAAACTATCTGAGTGGCAGACTCTGCCAGACCGGGGCGGCGGAGTGCGTGAAGGCTACGTAACGCAGGATAAAGCCGCAACCATCGGGCCTACGGATACATATGACGCTAGCCTAACAGATTGGGTCTCTCTTAACCGAATTAAGGTTGGGCGCGTCGTGGCAAACTTCGCCGCGGCAAATGGTATGTATAAAGACGACGGCAATAAACAGGGGACCTCTGTAACCGTTGAGGTTCAGTACCAATTAATCGGAGATGACGGTGCTCCTTACGGCCCTGTATACAATAAACGGGGTACTATTTCAGGCCGTACTAGCGATTACACAGGGGTCACTGTGTTCGCGGACCTTCCAACTGAATCCAGGGTTAGGGTGCGCTGCCGTAGGGTTAGTAACTTTGATTTTGACTTTGGCGGTACAGTGGTAGACGAGGTTTCGTACATTAACCTTTATGGGCAGGTACGTGATACTACGCCGCATTACGGCAATCGTACTACCGTACACTCAGCACGTAAGCAGACGCCGCGCGCGGCAGAGATTAAGCAACCACAGTTACGTATGGTCGCCACAGAGATGGTGTACAAATACCTCGGCAACGGCGTATTCGACACGGTTATGACGCCGAATACTCAGGCCGTTCAATCATTAATCCGTCTTGCCCGCGACCCGGTAGTAGGTAATCTCAACCTAACAACATCCAATATGGACAAGTTGTTAGCGACCCAGACCGAGATAGAAAACTATTTCGGTAACGCGGAGGCAGGCCAATTCTGCTACACTTTTGACGAATATAAAATGACCATGCAGGATATCATCAGCACAATAGCTGATGCTATTTTCTGCACTCCATATCGTAAAGGGCAGGACATATTACTGGATTTCGAGCGCCCTCGTATGGGGCCGGAGATGGTATTCACCCACCGCAGCAAAACCACAGCTTCTGAAAAGTGGACGCGTACATTCAACGACGCACAGGTATACGATAGTCTTAAGTTCTCCTACATCGACCCTGATACTAACGTTAAAGAGACAATCAGCATACCAGCAGAAGGAGGAGTTAATACTGAAACGTATGACTCTAAAGGGATTCGAAATTATAGACAGGCGTACTGGGCCGCATACCGCCGCTACCAGAAAAACTTGTTGAAAAAAGTCACGGTGTCCTTCACGGCGACAGAAGAAGGCGTTTTTGTATTACCGGGTCGCGCTATAAGCGTGGTTAAAGGCTCTCGCGTAGCCCCGCAAGATGGGTATATTGTTGCCGTTAATGGGCTTGCCCTAACACTATCGCAACCGGTTACATTTACCCCCGGTGACGACCACTCTTTAATCCTTAAGAAGCGCGACGGCGGTGTTCAGAGCGTTGCAGTGGTTCCGGGAAGCCACGACCGTGAAGTGATTATGCTATCCGCGCCTCAAGAAGCGATTTACACGGGGAATAGCGCACTAAAAACTGAGTTTTCATTCGGCAACGAAGCAAGGCATAATGCTCAGATGATTCTTGTTTCTACAGTCGACCCTGGAGACGACAGAACAGTTAAGATTACCGGGATTAACTACGAAGCAGATTTCTACAAATACGACGGCGTCGCACCTTTTGGTCGCGGTTTCTCCGACGGATTTAGCAACGGTTTTAGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
8a4acd62b085e39c2123971571e9027cbef0f8fe99ef402227ed618312863e08
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8017
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50