Protein

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Genbank accession
XDQ96504.1 [GenBank]
Protein name
long-tail fiber proximal subunit
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,55
TF
Evidence RBPdetect2
Probability 0,60
Protein sequence
MSDLLKQHFRATNGLDAGGNKVINVALADRNVKTDGVSVEYVIQENTIQKYDPTRGYLTDFAVTYGRRIWIANKDIPKPAGNFNQANWTSLRVDPNWIYTVRKGEFEIQSGQFINVDSNAAGNATLLLPLAPDEGDTIVVRDIGGRPGYNGILIKAQNTGASIVFGESRLREVRLTRPYSQIMLTFSNGAWRASLTDFGDTAKMVVPNGIVPTQVQSGDNVVRRYTSNSEIFITLPLFANSNDIINFTDLDGTSPINHMTVRTFDPTISIGTPGQTEVQVRTSGNGFLVYDSIDKIWRIFENDLRTRVRIITSDVTLMPNEHISVFGADNNTVKTINVTLPTDVAVGDTVKIAMNYMRKGQTVVVKASGGDTIASNLNLLQFPKRSEYPPDAAWVQSSSITFNGTTSYVPVLELAYIEEKATGKSYWIVTESDPTVERVDAKDNTTRARLGVIALATQAQANAESSPEKELAITPETLNGRRSTETQTGIARIATSSEVNQATTASYLDNVIVTPKKLNERSATETRRGLAEIASNAKMDEGTDDFTIVTPKKLLYRTTSDSRLGVIQLVKTGGAPNTTADRSSAGTGIFDHSDYKNAVTPKTLREYKATVNQSGIVWLASDSEVRNGTPSASNIPTVVTPEALHKKVATDGEIGLIQIASQTEVNAGGVTNKAVTPKTLNDRTATNDRTGIARFATPGAQGEFEAGTSSTVMVNPKLLFDKFANTDRIQVNTSSGLTITGNLWDHYTINIQEASTSQRGTTTLATAAEVRAGTDAKKIVTAATLHAKTATEGDIGLAQYATQAQVDAGTLSDRIVSPAYLKQTIQVTESWQATDSVRGTVRLSTGDGTWKGNDTDGSTLPDNGYASKGVAVSPYELNLTLKHYLPRLGKAYDTGMLGGQTPDKYARRDIAQTISGAWSFSQDTSFSNNISVQNIIYANGGEVKISPTADTGIVHVRFQNRDGSERGIIYAEPQTAAAGNLKIRVKNGTGATAASQTYTFGGNGTLGVPNEVSTITLRSSGNTIVGGTVMVKDVQMLAVEGLNSIFGAQSQSAFIRSRDADTQIFAQDSTGSYPILTTKNYARLADGRYVNKAGDTMTGNLNLSGSAIVITGSESWYVPTNETVLRQGSWTAEIKDATKLQGLRGYMVPIRTPIDPANPSTLVVTGYEEKTAAGGVLTQVGVTTNNTYQLWTPYPPTTETADKRFAHTVWMRIYNPNLNKFDDWMRVFTSATPPTAADIGAPSSVSTQVKTLEVLEWIKLGPVKIWPDRPNQTLKFEWVGD
Physico‐chemical
properties
protein length:1281 AA
molecular weight: 138449,17000 Da
isoelectric point:6,32848
aromaticity:0,07182
hydropathy:-0,32912

Domains

Domains [InterPro]
DC_1986
ATT
8–137
DC_1986 DC_1209
IPR048391
ATT
1127–1228
IPR048391
XDQ96504.1
1 1281
Architecture
ATT
STR
ATT
STR
ATT 8-137 | STR 348-1126 | ATT 1127-1228 | STR 1229-1270 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XDQ96504.1
1 1281
Domain Start End Length (AA) Confidence
N-terminal 1 841 841 0,8642
Central domain 842 1040 200 0,2190
C-terminal 1041 1281 240 0,6259
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-841
Central
842-1040
C-terminal
1041-1281

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage Phi_KR8
[NCBI] 		3240397 Uroviricota > Caudoviricetes >
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Genome Context

Genome Context

Tertiary structure

PDB ID
0a42effb40cb26fce2bca1c924ce0910bee6d2152e5df71c3e8e4beed1c8dab9
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5519
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50