Protein

View in Explore
Genbank accession
XDQ96504.1 [GenBank]
Protein name
long-tail fiber proximal subunit
RBP type
TSP
Evidence RBPdetect
Probability 0,55
TF
Evidence RBPdetect2
Probability 0,60
Protein sequence
MSDLLKQHFRATNGLDAGGNKVINVALADRNVKTDGVSVEYVIQENTIQKYDPTRGYLTDFAVTYGRRIWIANKDIPKPAGNFNQANWTSLRVDPNWIYTVRKGEFEIQSGQFINVDSNAAGNATLLLPLAPDEGDTIVVRDIGGRPGYNGILIKAQNTGASIVFGESRLREVRLTRPYSQIMLTFSNGAWRASLTDFGDTAKMVVPNGIVPTQVQSGDNVVRRYTSNSEIFITLPLFANSNDIINFTDLDGTSPINHMTVRTFDPTISIGTPGQTEVQVRTSGNGFLVYDSIDKIWRIFENDLRTRVRIITSDVTLMPNEHISVFGADNNTVKTINVTLPTDVAVGDTVKIAMNYMRKGQTVVVKASGGDTIASNLNLLQFPKRSEYPPDAAWVQSSSITFNGTTSYVPVLELAYIEEKATGKSYWIVTESDPTVERVDAKDNTTRARLGVIALATQAQANAESSPEKELAITPETLNGRRSTETQTGIARIATSSEVNQATTASYLDNVIVTPKKLNERSATETRRGLAEIASNAKMDEGTDDFTIVTPKKLLYRTTSDSRLGVIQLVKTGGAPNTTADRSSAGTGIFDHSDYKNAVTPKTLREYKATVNQSGIVWLASDSEVRNGTPSASNIPTVVTPEALHKKVATDGEIGLIQIASQTEVNAGGVTNKAVTPKTLNDRTATNDRTGIARFATPGAQGEFEAGTSSTVMVNPKLLFDKFANTDRIQVNTSSGLTITGNLWDHYTINIQEASTSQRGTTTLATAAEVRAGTDAKKIVTAATLHAKTATEGDIGLAQYATQAQVDAGTLSDRIVSPAYLKQTIQVTESWQATDSVRGTVRLSTGDGTWKGNDTDGSTLPDNGYASKGVAVSPYELNLTLKHYLPRLGKAYDTGMLGGQTPDKYARRDIAQTISGAWSFSQDTSFSNNISVQNIIYANGGEVKISPTADTGIVHVRFQNRDGSERGIIYAEPQTAAAGNLKIRVKNGTGATAASQTYTFGGNGTLGVPNEVSTITLRSSGNTIVGGTVMVKDVQMLAVEGLNSIFGAQSQSAFIRSRDADTQIFAQDSTGSYPILTTKNYARLADGRYVNKAGDTMTGNLNLSGSAIVITGSESWYVPTNETVLRQGSWTAEIKDATKLQGLRGYMVPIRTPIDPANPSTLVVTGYEEKTAAGGVLTQVGVTTNNTYQLWTPYPPTTETADKRFAHTVWMRIYNPNLNKFDDWMRVFTSATPPTAADIGAPSSVSTQVKTLEVLEWIKLGPVKIWPDRPNQTLKFEWVGD
Physico‐chemical
properties
protein length:1281 AA
molecular weight: 138449,17000 Da
isoelectric point:6,32848
aromaticity:0,07182
hydropathy:-0,32912

Domains

Domains [InterPro]
IPR048391
1127–1228
IPR048391
XDQ96504.1
1 1281
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage Phi_KR8
[NCBI] 		3240397 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XDQ96504.1 [NCBI]
Genbank nucleotide accession
PP442064 [NCBI]
CDS location
range 41966 -> 45811
strand -
CDS
ATGAGCGATTTACTGAAACAACATTTCCGTGCAACAAACGGTTTGGATGCCGGCGGAAATAAAGTTATAAATGTGGCACTAGCTGACCGCAACGTTAAAACCGACGGCGTCTCCGTCGAGTACGTTATTCAAGAAAACACTATCCAAAAATATGACCCGACGCGTGGGTATCTCACTGATTTTGCTGTGACTTATGGACGTCGTATCTGGATTGCAAATAAAGATATTCCAAAGCCGGCTGGAAATTTTAACCAGGCGAATTGGACTTCTTTACGTGTTGACCCGAACTGGATTTATACTGTCCGTAAAGGAGAGTTTGAAATTCAATCTGGTCAGTTCATCAACGTTGACTCTAACGCTGCAGGTAATGCTACATTACTGCTTCCGTTAGCACCAGATGAAGGCGATACTATCGTAGTTCGTGATATTGGCGGGCGTCCTGGCTATAACGGAATCTTAATTAAAGCACAAAATACTGGTGCGTCTATCGTATTTGGTGAATCGCGTCTGCGTGAGGTAAGACTTACACGTCCGTATTCACAAATTATGCTTACGTTTAGTAATGGCGCATGGCGTGCAAGTTTAACCGATTTTGGCGATACTGCTAAAATGGTAGTTCCGAACGGGATTGTTCCAACTCAGGTACAGTCAGGTGATAACGTAGTTCGTCGTTATACTTCCAACTCAGAGATTTTTATTACTCTGCCGTTGTTCGCTAATTCAAACGATATCATCAATTTTACTGACCTTGACGGTACATCGCCAATTAACCATATGACTGTGCGTACGTTTGACCCAACTATCTCAATTGGGACTCCTGGACAAACAGAGGTTCAAGTACGTACTTCAGGTAATGGGTTTTTGGTATATGACTCGATTGACAAAATCTGGCGTATTTTTGAAAATGATTTACGCACCCGAGTAAGAATAATTACTTCTGACGTTACTTTAATGCCTAACGAGCATATTTCTGTGTTTGGCGCAGATAATAACACGGTTAAAACAATTAACGTCACTTTACCTACTGACGTAGCTGTTGGTGATACCGTTAAAATCGCAATGAACTACATGCGTAAAGGACAAACTGTAGTAGTTAAAGCCTCTGGCGGTGATACCATCGCAAGTAATTTGAATTTACTACAATTTCCAAAACGTTCAGAGTATCCACCTGATGCAGCATGGGTTCAATCAAGCTCGATTACCTTTAACGGAACTACATCATATGTTCCTGTTCTTGAGCTTGCATATATTGAAGAAAAAGCAACAGGAAAAAGCTATTGGATTGTAACTGAATCTGACCCTACCGTAGAACGTGTTGATGCTAAAGACAATACTACCAGAGCACGATTAGGTGTTATTGCTCTTGCTACACAGGCTCAAGCTAACGCGGAGTCAAGTCCGGAAAAAGAATTAGCAATTACTCCAGAAACCTTAAACGGACGTCGTTCTACTGAAACTCAGACTGGTATAGCAAGAATTGCAACTTCTAGTGAAGTTAATCAGGCAACAACTGCTTCTTACTTGGATAATGTAATCGTTACTCCTAAAAAGCTTAACGAAAGGTCTGCTACTGAAACCCGTAGAGGTTTAGCTGAAATTGCGTCTAATGCTAAAATGGATGAAGGAACAGACGATTTTACAATTGTTACTCCTAAGAAGTTGCTTTATCGTACTACATCGGATTCGCGGTTAGGTGTTATTCAATTAGTAAAAACTGGTGGTGCTCCTAACACAACTGCTGACCGTTCTTCTGCCGGCACCGGTATATTCGATCATTCTGATTACAAAAATGCAGTTACTCCAAAAACTCTTCGTGAGTATAAAGCTACTGTAAACCAATCAGGAATAGTCTGGTTAGCAAGCGATAGTGAAGTTAGAAACGGAACTCCTTCTGCTTCAAATATTCCTACGGTTGTTACACCGGAAGCTTTGCATAAAAAAGTTGCTACTGATGGAGAAATTGGATTAATCCAAATAGCTTCACAGACAGAAGTTAATGCTGGCGGAGTGACTAATAAAGCAGTTACACCTAAAACATTAAATGACCGTACAGCAACTAACGATCGTACTGGTATTGCTCGCTTCGCGACACCTGGTGCCCAGGGTGAATTTGAAGCTGGTACTTCAAGTACAGTAATGGTAAACCCTAAATTATTATTTGATAAATTTGCTAATACTGATCGTATCCAAGTTAATACTAGTTCTGGCTTAACTATTACTGGGAACCTCTGGGACCATTATACCATCAACATACAGGAAGCAAGTACTTCTCAAAGAGGTACAACCACTCTTGCTACTGCTGCTGAGGTTAGAGCTGGAACTGATGCTAAGAAAATAGTTACTGCTGCCACGCTACATGCTAAAACAGCAACTGAAGGAGATATTGGTCTCGCTCAGTATGCTACACAGGCCCAGGTTGATGCAGGCACGCTAAGTGATAGAATTGTTTCTCCTGCTTACTTGAAACAGACTATTCAGGTAACAGAGTCGTGGCAAGCTACAGACAGCGTTAGAGGGACCGTGAGGCTATCTACAGGCGATGGAACGTGGAAAGGTAATGATACCGATGGCTCAACTCTTCCGGATAACGGGTATGCCTCTAAGGGCGTCGCAGTGTCTCCATATGAATTGAACCTTACACTGAAACATTACTTGCCTCGTCTCGGTAAAGCCTATGACACCGGAATGCTAGGTGGTCAAACCCCAGACAAATATGCTCGTCGCGATATAGCGCAGACTATTTCTGGAGCGTGGTCATTTAGTCAGGACACTTCATTTAGCAATAATATTTCTGTCCAGAATATTATATATGCTAATGGTGGTGAAGTTAAAATTTCTCCAACTGCTGACACCGGAATCGTGCATGTTCGTTTTCAAAATAGAGATGGAAGCGAGCGTGGTATAATTTATGCAGAACCTCAAACGGCTGCAGCTGGAAATTTAAAAATTCGTGTCAAAAATGGAACTGGAGCTACTGCTGCAAGCCAAACTTACACATTTGGTGGAAACGGCACCTTAGGCGTTCCTAATGAAGTATCAACTATAACTTTGAGGTCTTCTGGAAATACAATAGTTGGCGGAACTGTAATGGTTAAGGACGTTCAGATGCTTGCTGTCGAGGGATTGAATTCAATATTCGGCGCCCAATCACAGTCCGCATTTATTCGTTCCCGTGACGCTGATACACAAATTTTTGCACAGGATTCAACTGGATCGTATCCAATTTTAACTACCAAAAACTATGCAAGACTAGCTGATGGCCGTTATGTTAATAAAGCTGGCGATACCATGACTGGTAATCTTAACTTAAGCGGTTCTGCTATCGTCATTACAGGTTCTGAATCATGGTATGTTCCAACGAATGAAACTGTACTGAGACAAGGTTCTTGGACTGCTGAAATTAAAGACGCTACTAAATTACAAGGTCTTCGTGGTTATATGGTTCCGATCAGAACACCAATTGACCCTGCTAACCCAAGCACTTTAGTAGTGACCGGATATGAAGAAAAGACTGCTGCTGGCGGTGTTTTAACTCAGGTTGGTGTAACTACAAACAATACTTATCAGCTTTGGACACCTTATCCTCCGACAACCGAAACTGCTGATAAGCGTTTCGCACATACTGTGTGGATGAGGATTTATAATCCAAACCTTAATAAGTTTGATGATTGGATGCGAGTATTTACATCTGCTACTCCTCCAACTGCAGCTGATATCGGAGCTCCAAGCTCAGTATCAACTCAGGTTAAAACCCTTGAAGTCCTGGAATGGATTAAGCTTGGTCCAGTTAAAATCTGGCCAGACCGTCCAAATCAAACTCTCAAATTTGAATGGGTAGGTGATTAA

Tertiary structure

PDB ID
0a42effb40cb26fce2bca1c924ce0910bee6d2152e5df71c3e8e4beed1c8dab9
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5519
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A Strategy of Expanding the Host Range of Bacteriophages and Delaying Bacteriophage Resistance: A Bacteriophage Cocktail Treatment Approach in Klebsiella pneumoniae Chen,H. 2024-11-14 — GenBank