Protein

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Genbank accession
AFR52428.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,95
TF
Evidence Phold
Probability 1,00
Protein sequence
MAYGIDNVWSFVNDSQTGIDKVPVNKIILLKSENKLYLKKQEGGLTATSTVNEAILNNSIVSLSSDGNLGIVDSSIKVINDPEFTTTDNISKGKKMFKIAIEPDTIIQVLGLYIENTANSSIDAVPFDYIIKNNNVVIYTDNDTIPIKKIIYSKTKSSQLSLSSLPKLLTENLEWTVGTNGTFSNLADALQEASKYISVTNYKITITMKSSYKLTESLHINNANLGHVVLTSEDDYVDFDGTMTPNPSFINQYAANPIAVSFTFGISPTISFKLRFSSVPTMFSMAFGFLQTNFKLNNSGVYNAKWGVGSVGCIGLVQNSTFENCTESGVVADNGSILNVWENNTFKTCSGNILWSADSSKIYAGNVTFDGTYNNVAANCGVSHIASELGFNTPIFKNISNSNSYALYASYGGNISCSNSIVVSGFNKTNITANVFSSSGYIQLY
Physico‐chemical
properties
protein length:445 AA
molecular weight: 48287,72820 Da
isoelectric point:5,22034
aromaticity:0,10337
hydropathy:-0,02697

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Campylobacter phage CP30A
[NCBI] 		1229752 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Campylobacter jejuni subsp. jejuni
[NCBI] 		32022 Bacteria > Proteobacteria > delta/epsilon subdivisions > Epsilonproteobacteria > Campylobacterales > Campylobacteraceae
Host Campylobacter jejuni subsp. jejuni PT14
[NCBI] 		1201032 Bacteria > Proteobacteria > delta/epsilon subdivisions > Epsilonproteobacteria > Campylobacterales > Campylobacteraceae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AFR52428.1 [NCBI]
Genbank nucleotide accession
JX569801 [NCBI]
CDS location
range 102432 -> 103769
strand -
CDS
ATGGCATATGGTATAGATAATGTATGGTCATTTGTAAATGATTCACAAACTGGCATAGATAAGGTTCCAGTCAATAAAATAATATTACTAAAAAGTGAAAATAAATTATATTTAAAAAAACAAGAAGGTGGATTGACAGCTACATCAACTGTAAATGAAGCAATTCTTAATAATAGTATTGTATCATTATCAAGTGATGGTAATTTAGGTATAGTTGATAGTAGTATCAAAGTAATAAATGATCCAGAATTTACCACAACTGATAATATCAGTAAAGGTAAAAAAATGTTCAAAATAGCAATTGAACCTGATACAATAATTCAAGTTCTGGGATTATATATAGAAAATACTGCAAACTCATCAATAGATGCAGTACCTTTTGATTATATTATTAAAAATAATAATGTAGTAATATATACTGATAATGATACAATTCCTATCAAAAAGATAATTTATTCAAAAACAAAAAGCAGTCAATTAAGTTTAAGTAGTTTACCTAAACTATTAACAGAGAATCTTGAATGGACTGTTGGTACAAATGGAACATTTTCAAATTTAGCAGATGCATTACAAGAAGCTTCAAAATATATATCTGTGACAAATTATAAAATTACTATAACAATGAAGTCATCGTATAAATTAACTGAAAGTCTTCATATCAATAATGCAAATTTAGGACATGTTGTTTTAACATCAGAAGATGATTATGTTGATTTTGATGGAACTATGACACCTAATCCATCATTTATAAATCAATACGCAGCAAATCCTATTGCAGTTTCATTTACATTTGGAATATCTCCAACAATATCGTTTAAACTTAGATTTAGTTCAGTACCTACTATGTTTTCGATGGCATTTGGATTCTTACAAACTAATTTTAAGCTTAATAATTCTGGTGTATATAATGCAAAATGGGGTGTTGGTAGTGTTGGATGTATAGGATTAGTACAAAACAGTACATTTGAAAATTGTACTGAATCGGGTGTAGTAGCAGACAATGGTAGTATATTAAATGTGTGGGAAAATAATACATTTAAAACTTGCAGTGGAAATATACTATGGAGTGCCGATTCAAGTAAAATATATGCTGGAAATGTTACATTTGATGGAACATATAATAATGTAGCTGCTAATTGTGGTGTTTCGCATATTGCATCTGAATTAGGATTTAATACCCCTATATTTAAAAATATTTCAAACAGTAATTCATATGCTTTATATGCTTCTTATGGTGGGAATATTTCATGTAGTAATAGTATAGTTGTATCTGGTTTTAATAAAACTAATATTACTGCAAATGTTTTTTCATCTAGTGGTTATATACAATTATATTAG

Tertiary structure

PDB ID
4ada6218b1c189dd93918d75a253ccae50d5195051d1b9a3b146ae089c5af767
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6877
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Recombination and diversity amongst Campylobacter bacteriophage in chickens Connerton,I.F., Siringan,P. and Cummings,N.J. 2007-03-27 — GenBank