Protein

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Genbank accession
YP_009323450.1 [GenBank]
Protein name
tail fiber protein; host specificity
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,69
Protein sequence
MAVGGPWVGSSAVANTGQNWMGGAAQRLRMGIPFWMSNMNGRSVEVIHTITANHNFNGQWFRDRCFEAGSAPIVFNITGDIVSYDRNVPLFFMNADTPNEYVNLTIHGGVHMWGRGGHGGWTHSGGDGNGQWGGDCIVNHIGHRLRIWNYGVICGGGGGGGGIAYRPHSGANWQDIGGGGGRPFGPGGGGGYSGGGASYESPGGGYDYGNAHSGRGGDAGGAGGNAWNDGGKVLKVGAGGGSGAAVAVSAPAWGATGTIYGPWLS
Physico‐chemical
properties
protein length:265 AA
molecular weight: 26866,16790 Da
isoelectric point:7,15310
aromaticity:0,10943
hydropathy:-0,28528

Domains

Domains [InterPro]
IPR048291
ATT
1–39
IPR048291 IPR007932
DC_2135
STR
1–139
DC_2135
YP_009323450.1
1 265
Architecture
ATT
STR
RBD
ATT 1-39 | STR 40-139 | RBD 140-264 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage WG01
[NCBI] 		1837931 Uroviricota > Caudoviricetes > Pantevenvirales > Tevenvirinae > Dhakavirus
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009323450.1 [NCBI]
Genbank nucleotide accession
NC_031928.1 [NCBI]
CDS location
range 160103 -> 160900
strand +
CDS
ATGGCAGTTGGAGGACCGTGGGTAGGATCGTCTGCAGTAGCTAATACAGGACAAAATTGGATGGGCGGCGCCGCTCAACGATTGAGAATGGGTATTCCGTTTTGGATGAGTAATATGAACGGTCGGTCTGTTGAAGTAATTCACACCATAACAGCAAACCATAATTTTAATGGCCAGTGGTTCCGCGACCGCTGTTTTGAAGCAGGCAGCGCACCTATTGTGTTTAATATCACAGGCGATATAGTATCTTACGACCGTAATGTTCCATTGTTCTTTATGAATGCCGACACACCTAATGAATATGTCAATTTGACTATTCATGGAGGCGTGCATATGTGGGGCCGAGGCGGCCACGGTGGGTGGACCCATTCAGGTGGCGACGGTAACGGTCAATGGGGCGGTGATTGTATAGTCAACCATATAGGTCATAGACTACGTATTTGGAACTATGGGGTTATCTGTGGCGGTGGCGGTGGTGGTGGTGGCATTGCGTATCGTCCTCACTCAGGTGCTAACTGGCAAGATATCGGTGGTGGTGGTGGACGTCCATTTGGTCCTGGTGGCGGTGGTGGATACTCCGGTGGTGGTGCTTCTTATGAAAGCCCTGGCGGTGGATACGATTATGGTAATGCCCACTCAGGTCGTGGCGGTGATGCTGGCGGCGCTGGCGGCAACGCATGGAATGATGGTGGTAAAGTTCTTAAAGTTGGGGCTGGGGGCGGTTCTGGGGCTGCTGTTGCCGTTTCTGCTCCTGCATGGGGCGCGACAGGTACGATTTACGGTCCTTGGCTTAGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
5b670213e998b24d72847887e83285a69a67d07aaa3453e934799c0cad8f85fd
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7930
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome analysis of T4 like phage of avian pathogenic Escherichia coli Xu,J., Chen,M. and Zhang,W. 2016-05 — GenBank