Protein

View in Explore
Genbank accession
XLM27600.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,66
Protein sequence
MTITVDDVKLLKSQRLTDEDDGGGRATGQAVVDREINNLFPDISRLDRTIGRINLRKAFAGISSNSAEPYLGAHAIVTRAPADPRVSVLLFNTGSQTDERRDARNAIESFVVPAVSASFELLGNQLQGQRAIACVQREEQRLPEIGEVYQLVFESRSQYVRITDVEARLEQFAHDYGNGNFVNFTRRRLDLSISAPLGATFPGGQVTPGGTTSPKSQVLSTQVADAARYYGISPLAEAVSRGALSLRVKSVYSQLVPSTTRENALVDQLAGYQRRLFAAAGPARTVNLNVANIGSGRSRTFLGTGCAPGSLSLSAGGGVFADDRKGGLRYISGSNWIASGTVDYESGAIEMAASGSGWSGTASATYQPAAAATGEAVTGEIPIELGNRGFVYTLSLSEAPPQPGTLVVSFLALGKWQEIRDQGNGELAGEGTGTVDFATGSVSITLSALPDVGSSLIYAYVGQNDAALTQRTGTSVQARARINRTLPHQGLLPGSYKATFKVGGVERTVLDSGNGSLSGTGGSGQINYADGKVSMELSATPDAGSGIVHTYQQGSVTDSPLAVTSDSTGMCIGTLPGAPLKAGSVRLSWITKRRQAAPTLGADMGTGALPIFESEITVDNSVTDDAAGGWAGRAGTINYETGEFSLKVAGNYVFKEYTYYTDTVDNFGMKKLRLVATDTTLLEGFGGTLSVRAQSRGVEYGEQTDSQTVAPVTLDLLPGVAEPILPGSLVFTWAGEVYVDRSGVLYKNINSSTNAGIAVGSVDYAGRTATLNTYGSGAAPTVTLLACLTTNAGFSVTSMTFRTPGAPLRSASLQVTAVRLDTAQIVTTTADANGKLNGAVVKGSVDIVTGIVRLRFTSNLEDTTGASDIPVIPLLLRYNAVVFTSLPLDATLLGLDPVRLPADGRVPVFREGDVMVVAHTAETTVPSPQAGGVLQLGRDQQAEIKVVDANAVELASAGYSVDLERGRVTWANPLVLQDAEGNPLTLPLVVRDRVEHMTLCTEVQVNGELGISSPLPWDLPAGETLASSALSWGDLQARLHHWFTQRTWDIGSPNWTDEPKGDGTTANYNSLAYPPLIANRGAIDAKWALVFNSSTSFSVVEEKLGVIANGTTTTDTAPINPETNTPYFTIRKEGWGSGWAAGNAVRFNTDSCLGPMWIVRTVLSGKGTVEDDEFHLQIRGDAD
Physico‐chemical
properties
protein length:1183 AA
molecular weight: 124631,87360 Da
isoelectric point:5,05091
aromaticity:0,06932
hydropathy:-0,09831

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage Presto
[NCBI] 		3377947 Viruses >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XLM27600.1 [NCBI]
Genbank nucleotide accession
PQ533662 [NCBI]
CDS location
range 37912 -> 41463
strand +
CDS
ATGACGATCACCGTCGATGATGTAAAGCTGCTGAAATCCCAGCGCCTCACCGATGAGGACGACGGCGGCGGCCGTGCCACCGGGCAGGCCGTGGTGGATCGCGAGATCAACAACCTGTTTCCCGATATCTCGCGCCTGGACCGGACCATCGGCCGGATCAACCTGCGCAAGGCCTTCGCCGGCATCAGCTCGAACAGCGCCGAGCCGTACTTGGGCGCTCATGCCATCGTCACGCGGGCGCCGGCCGATCCGCGTGTCTCGGTGCTGCTGTTCAACACCGGTAGCCAGACCGACGAGCGCCGCGACGCGCGCAACGCCATCGAGTCCTTCGTGGTGCCGGCCGTGTCCGCCTCGTTCGAACTGCTGGGCAACCAGTTGCAGGGCCAGCGCGCCATCGCTTGCGTGCAGCGCGAAGAACAGCGGCTACCCGAGATTGGCGAGGTCTATCAGTTGGTGTTCGAGTCGCGCTCGCAGTATGTCCGCATCACCGACGTCGAGGCGCGGCTCGAACAATTCGCCCACGACTACGGCAACGGCAACTTCGTGAACTTCACCCGGCGCCGGCTGGACCTGTCGATCAGCGCGCCACTGGGCGCGACCTTCCCCGGCGGCCAGGTGACGCCAGGCGGTACCACCAGCCCGAAAAGCCAGGTGCTCAGCACCCAGGTCGCCGATGCCGCGCGGTACTACGGCATCAGCCCCCTGGCCGAGGCTGTCAGCCGCGGCGCGCTGAGCCTGCGGGTCAAGTCGGTCTATTCCCAACTGGTGCCCAGTACCACCCGGGAAAACGCGCTGGTCGACCAACTGGCCGGCTACCAGCGGCGCCTGTTCGCTGCGGCCGGGCCGGCGCGGACGGTCAACCTGAATGTCGCGAACATAGGCAGCGGCAGGTCGCGGACGTTCCTCGGCACCGGCTGCGCGCCGGGTTCGCTGTCGCTGAGCGCCGGCGGCGGTGTGTTCGCCGACGACCGCAAGGGAGGCCTGCGCTACATCAGCGGTTCGAACTGGATTGCCAGCGGTACCGTCGACTACGAGAGCGGCGCAATCGAGATGGCGGCCTCCGGCAGCGGCTGGAGCGGGACAGCGAGCGCCACCTACCAGCCTGCCGCGGCGGCGACGGGCGAAGCGGTGACCGGGGAGATCCCTATCGAACTGGGCAACCGCGGCTTCGTCTACACCCTGTCGCTGTCCGAAGCGCCGCCCCAGCCGGGCACCCTGGTGGTCTCGTTCCTCGCCCTGGGCAAATGGCAGGAGATCCGCGACCAGGGCAACGGCGAATTGGCCGGGGAAGGCACCGGCACGGTGGACTTCGCGACCGGCTCGGTATCCATCACCCTGAGCGCGCTGCCGGACGTGGGGAGTTCGCTGATCTACGCCTACGTCGGGCAGAACGATGCGGCGCTGACCCAGCGCACCGGCACCAGCGTGCAGGCGCGTGCGCGGATCAACCGGACGTTGCCGCACCAGGGGCTGTTGCCCGGCTCCTACAAGGCGACGTTCAAGGTCGGCGGGGTAGAGCGCACCGTGCTCGATAGCGGCAACGGCTCGCTCAGCGGTACCGGTGGCAGCGGCCAGATCAACTATGCCGACGGCAAGGTCAGCATGGAATTGAGCGCCACCCCGGATGCCGGGAGTGGGATCGTGCATACCTACCAGCAGGGCAGCGTGACCGACAGCCCGCTGGCGGTGACCTCCGACAGCACCGGCATGTGCATCGGCACTCTCCCCGGGGCGCCGCTCAAGGCGGGCAGCGTGCGCCTATCGTGGATCACCAAGCGTCGCCAGGCGGCACCGACCCTCGGTGCTGACATGGGCACCGGGGCGCTGCCGATCTTCGAATCGGAGATCACCGTGGACAACTCGGTGACCGACGACGCCGCCGGTGGCTGGGCCGGGCGCGCCGGGACGATCAACTACGAGACCGGCGAATTCAGCCTGAAGGTGGCCGGCAACTACGTGTTCAAGGAGTACACCTACTACACCGACACGGTCGACAACTTCGGTATGAAGAAGCTGCGCCTGGTGGCCACCGATACCACGTTGCTGGAGGGGTTCGGCGGCACGCTGAGCGTGCGCGCGCAGAGCCGCGGCGTCGAGTACGGCGAGCAGACCGATTCGCAGACCGTCGCTCCGGTGACCCTGGACCTGTTGCCTGGTGTGGCCGAGCCGATCCTGCCGGGCTCGCTGGTGTTCACCTGGGCCGGCGAGGTCTACGTCGACCGCTCCGGTGTGCTCTACAAGAACATCAACAGCAGCACCAACGCCGGCATCGCCGTCGGCTCGGTGGACTACGCCGGCCGTACCGCGACGCTGAATACCTATGGCTCGGGGGCGGCGCCGACGGTCACGCTGCTGGCCTGCCTGACCACCAACGCCGGCTTCAGCGTCACCAGCATGACCTTCCGCACGCCGGGGGCGCCGCTGCGTTCTGCGAGCCTGCAGGTGACGGCGGTCCGCCTGGATACCGCGCAGATCGTGACCACCACGGCGGACGCGAACGGCAAGCTCAATGGGGCGGTGGTCAAGGGTAGCGTCGATATCGTGACCGGCATCGTCCGGCTGCGCTTCACCAGCAATCTGGAGGACACCACCGGGGCCAGCGATATCCCGGTGATTCCGCTGCTGCTGCGCTACAACGCGGTCGTCTTCACCTCGCTGCCGCTGGACGCAACCCTGCTGGGCCTGGACCCGGTGCGACTGCCGGCGGACGGGCGGGTACCAGTGTTCCGCGAGGGCGACGTGATGGTGGTTGCCCATACCGCCGAGACCACGGTGCCGAGTCCTCAAGCCGGGGGCGTGCTGCAGCTCGGCCGCGACCAGCAGGCCGAGATCAAGGTGGTGGACGCCAACGCGGTGGAACTGGCCTCGGCGGGCTACAGCGTCGACCTGGAACGCGGCCGGGTGACCTGGGCGAACCCGCTGGTTCTACAGGATGCCGAGGGCAACCCGCTGACCCTCCCGCTGGTGGTGCGCGACCGGGTTGAGCACATGACCCTCTGCACCGAGGTTCAGGTGAACGGCGAGTTGGGAATCTCCTCGCCGCTGCCCTGGGATCTGCCAGCGGGCGAAACGCTGGCGTCCAGTGCGCTGAGCTGGGGCGACCTGCAGGCGCGGCTGCATCACTGGTTCACCCAGCGGACCTGGGATATCGGCTCGCCGAACTGGACCGACGAGCCGAAGGGCGACGGGACCACCGCCAACTACAACAGCCTCGCCTATCCACCGCTGATCGCCAACCGCGGTGCGATCGATGCGAAGTGGGCGCTGGTGTTCAACTCCTCGACCAGTTTCAGCGTGGTGGAGGAGAAGCTGGGGGTCATCGCCAACGGCACTACCACCACCGACACGGCGCCGATCAACCCGGAGACGAACACGCCGTACTTCACCATCCGCAAGGAAGGCTGGGGCAGTGGCTGGGCGGCCGGCAACGCAGTGCGCTTCAACACCGACTCGTGCCTGGGGCCGATGTGGATCGTGCGGACGGTACTCAGCGGCAAGGGCACCGTCGAGGACGATGAATTCCACCTGCAGATCAGAGGAGACGCGGACTGA

Tertiary structure

PDB ID
b4619f913ff84623e3d2ef48984c45b68fb356d0c75c0c042784db9c030bc62d
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2314
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Temperate phage-antibiotic synergy is widespread - extending to Pseudomonas - but varies by phage, host strain, and antibiotic pairing Fatima,R. and Hynes,A.P. 2024 — GenBank