Protein

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Genbank accession
AGN33874.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,88
TF
Evidence RBPdetect2
Probability 0,59
Protein sequence
MSTVRVNQIEASSEHDYAIEMDATTDINVAGTYENNPSKKLVIPSGTEAQRPGIPQIGMMRHNTESNAAEVYDGTGWIDFIGGAGIGTSNVTGDGTSVENAAFSATALKEEYPSTTSGAYYYKIPGTNNVKRLWTDFSNDGGNWVIVSKWGGHSKNTTNVYDAAERNVSNLAVSTLDGYADYSRLSRDDMNAIWQDSRFVVRIHFKNDDATATSGIYFQKKLNRQREMDFWRAHYHPLQWSNGITNSYQATGGGTNYQVSFAVANTNPEISNYSGTTNFQPATDNVAGGSGYNANMGWWDRGHVTAPNFGVIEISRHMGFFGDINQGNQWIFTGATDSRFNNNENRRTIVLLRW
Physico‐chemical
properties
protein length:354 AA
molecular weight: 39167,29450 Da
isoelectric point:5,49181
aromaticity:0,11582
hydropathy:-0,61328

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-CAM8
[NCBI] 		754038 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Synechococcus sp. WH 7803
[NCBI] 		32051 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AGN33874.1 [NCBI]
Genbank nucleotide accession
HQ634178 [NCBI]
CDS location
range 29247 -> 30311
strand +
CDS
ATGAGTACAGTTAGAGTAAATCAAATAGAAGCATCTTCAGAGCATGATTATGCTATTGAGATGGATGCGACTACAGATATCAATGTTGCTGGAACTTATGAAAATAATCCATCAAAGAAATTAGTAATACCTAGTGGTACTGAGGCACAACGTCCTGGAATACCTCAAATAGGTATGATGCGACATAATACTGAGAGTAATGCAGCAGAAGTTTATGATGGTACAGGTTGGATTGATTTTATCGGTGGTGCTGGAATTGGAACTAGTAATGTAACTGGTGACGGCACAAGTGTGGAAAATGCAGCATTTAGTGCAACTGCTCTAAAAGAAGAATATCCAAGTACTACAAGCGGTGCATATTATTATAAAATTCCTGGTACAAATAATGTAAAACGTTTATGGACGGATTTTAGTAATGATGGTGGAAACTGGGTCATCGTTAGTAAATGGGGTGGTCACAGTAAAAATACTACAAACGTTTATGATGCAGCAGAAAGAAATGTTTCTAATTTAGCAGTATCTACACTTGATGGATATGCAGATTATTCACGACTTTCTAGAGATGATATGAATGCCATTTGGCAAGATAGTAGATTTGTTGTTAGAATTCATTTTAAAAATGATGATGCCACTGCTACTTCTGGAATTTATTTTCAGAAGAAATTAAATCGTCAAAGAGAGATGGATTTTTGGAGAGCACATTATCATCCTCTGCAATGGAGTAATGGCATCACGAATAGTTATCAAGCAACTGGTGGTGGTACTAATTATCAGGTGTCTTTTGCTGTAGCAAATACCAATCCAGAAATTTCTAATTATAGTGGAACAACTAACTTTCAACCTGCTACAGATAATGTTGCTGGTGGTAGTGGATATAATGCTAATATGGGATGGTGGGACCGTGGACATGTAACGGCACCAAATTTTGGTGTTATTGAAATCTCTAGACATATGGGATTTTTTGGTGATATCAACCAAGGTAACCAATGGATATTTACAGGTGCTACAGATAGTAGATTTAATAATAACGAGAATAGAAGAACTATCGTTCTTCTTCGTTGGTAA

Tertiary structure

PDB ID
a1d05bdcb516236bb4642215de69840e8713995ce4dd834ac283e68a7b7ff6bf
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5362
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Genome Sequence of Synechococcus phage S-CAM8 0608BI06 Henn,M.R., Martiny,J., Weihe,C., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Chapman,S.B., Erlich,R., Young,S.K., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Chen,Z., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heilman,E.R., Heiman,D., Hollinger,A., Howarth,C., Larson,L., Mehta,T., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., White,J., Haas,B., Nusbaum,C. and Birren,B. 2011-09-23 — GenBank