Protein

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Genbank accession
YP_010844739.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MLRPKLDRVWTSNNANLRRDPGDAKYLQGWIAEIPTFQVLNYLQYKVDTTLLALAERGVFEWGTDVQYGLGSLVWDDATKTIYVATVGAPSRTLRPSQNLGQWAASSIQVSRYDYDDIAGKISAHIADVTTNPHKITANMIGAYNKSQIDNLIAQYNALVASHANDRNNPHQVTAAQAGAVPVTGGTYAGAVTFQQGMLFDAGGTTKLAFGAQGLYMQSVNTRIGIDSSGVPVVGNVATGINSRIITDASFAEAKAREEPNYSIPYPNYSQHLIGDFNMNIGSGEFTAPDSWQFGPQFGSSLYVPAQTPTATALQTTNIPYSTSVTTLCMDILSNSPRIPTSSAVMFEIGFRAASGSFVHIQLLENGQVYGRRRDNGVASPTIESTRSLLPAQVNNWYRIVATFSDTGIRLYFDGVLVANTTASTTKGAVVEFARMGIMSSARNIAIRNFRMWDSALTDKQISTL
Physico‐chemical
properties
protein length:465 AA
molecular weight: 50419,03130 Da
isoelectric point:7,02191
aromaticity:0,09462
hydropathy:-0,14344

Domains

Domains [InterPro]
DC_0782
STR
6–462
DC_0782
G3DSA:2.60.120.200
STR
269–465
G3DSA:2.60.120.200
IPR013320
STR
319–465
IPR013320
PF13385
LEC
341–463
PF13385
YP_010844739.1
1 465
Architecture
STR
STR 6-465
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Yersinia phage PYps16N
[NCBI] 		2801354 Uroviricota > Caudoviricetes > Chaseviridae > Carltongylesvirus > Carltongylesvirus PYps16N
Host Yersinia pseudotuberculosis
[NCBI] 		633 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010844739.1 [NCBI]
Genbank nucleotide accession
NC_079179.1 [NCBI]
CDS location
range 46500 -> 47897
strand +
CDS
ATGTTAAGACCAAAACTTGATAGGGTTTGGACTTCGAACAACGCCAACTTAAGGCGTGACCCAGGAGATGCCAAGTATCTCCAAGGTTGGATTGCAGAAATCCCAACGTTCCAAGTTCTAAACTATTTGCAATACAAAGTTGACACTACCCTATTGGCATTGGCTGAACGTGGTGTCTTCGAATGGGGAACTGACGTCCAATACGGATTAGGTTCCTTAGTGTGGGACGATGCAACTAAGACTATTTATGTTGCAACTGTTGGTGCCCCAAGTCGCACCCTTCGTCCGAGTCAGAACTTAGGACAGTGGGCTGCGAGTTCCATTCAAGTTTCTCGTTACGATTATGATGACATTGCTGGTAAGATTTCTGCACACATTGCAGACGTCACTACAAACCCTCATAAGATAACGGCCAACATGATTGGGGCATATAACAAATCACAGATTGATAACCTGATTGCTCAGTATAATGCCTTGGTTGCAAGCCACGCAAATGACCGTAACAACCCGCACCAGGTAACTGCTGCACAAGCTGGTGCTGTCCCAGTAACAGGTGGAACATATGCTGGTGCAGTAACATTCCAACAAGGTATGTTGTTTGATGCAGGTGGAACAACCAAGTTAGCATTTGGTGCTCAGGGTCTCTACATGCAGTCTGTAAATACCCGGATTGGTATTGACTCAAGCGGTGTTCCTGTTGTCGGCAATGTTGCAACTGGTATTAACTCCAGAATCATTACTGATGCTTCGTTTGCAGAGGCTAAGGCTCGTGAAGAACCAAACTACTCTATACCGTACCCAAACTACTCCCAGCACCTGATTGGTGACTTCAACATGAACATAGGTTCTGGCGAGTTTACTGCCCCAGACAGTTGGCAGTTTGGGCCGCAGTTTGGTTCCTCTTTATATGTGCCAGCCCAAACACCAACGGCCACTGCACTACAGACTACCAATATACCATACTCAACCAGCGTTACTACACTGTGTATGGATATACTATCTAACTCACCAAGGATTCCAACATCTTCTGCTGTAATGTTTGAGATTGGATTCCGTGCTGCATCTGGAAGTTTCGTACACATACAGCTGTTAGAAAATGGTCAAGTATATGGACGCAGAAGGGATAATGGTGTCGCGTCCCCGACGATTGAGAGTACAAGGTCACTTCTCCCTGCTCAGGTTAATAACTGGTACAGGATTGTTGCCACATTCTCTGACACAGGAATACGTCTATATTTCGACGGTGTGCTAGTAGCTAACACAACAGCATCAACAACAAAGGGTGCAGTAGTTGAATTCGCCAGAATGGGTATAATGTCCTCTGCCAGAAACATTGCTATTAGAAACTTTCGTATGTGGGACTCTGCTCTTACAGACAAACAAATCTCAACTTTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
e8956a8c10698b624e3f03eb080a0a78f92254673b2a80eb98a85a0645fb2cf0
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7297
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome of Yersinia pseudotuberculosis phages Hammerl,J.A. and Hertwig,S. 2018-05-10 — GenBank