Protein

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Genbank accession
ADO99212.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,85
TF
Evidence Phold
Probability 1,00
Protein sequence
MAQWNKDAQEYRAQDTTNFEVVMLADEDGNPINTFGSASNIPISAGQLAGYSYIHKFGGNPLLNNSTEETMWDEGGLYPWATMDTAATTLTTNSESGNNGAEITIQGLNENWEPITEVLTLDGTAQTTTNSWKRVFRGFVSGSQAITADFTLSKSGDVVLRIITAHQQTEMALYTVCAGKTAYMTTIDASTLKNESITVRMMLREYGGVFRCRHVFQASTGQYNHEFTIPKGIPEKTDIDLRALASSNNISGYASFELILVDN
Physico‐chemical
properties
protein length:263 AA
molecular weight: 28844,72010 Da
isoelectric point:4,65525
aromaticity:0,09125
hydropathy:-0,31293

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Prochlorococcus phage Syn1
[NCBI] 		444861 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Synechococcus sp. WH 8101
[NCBI] 		59932 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ADO99212.1 [NCBI]
Genbank nucleotide accession
GU071105 [NCBI]
CDS location
range 107932 -> 108723
strand +
CDS
ATGGCACAGTGGAACAAGGATGCTCAAGAATATAGAGCACAGGACACAACAAACTTTGAAGTAGTGATGCTTGCCGATGAAGACGGCAACCCCATCAATACATTTGGTTCTGCTTCTAATATTCCTATTTCTGCTGGACAGTTAGCAGGATATAGTTACATTCATAAGTTTGGTGGGAATCCTCTACTGAATAACTCTACTGAAGAGACTATGTGGGATGAGGGTGGACTTTATCCTTGGGCGACTATGGATACTGCTGCTACTACACTAACCACAAATTCTGAATCTGGTAATAACGGAGCAGAGATTACCATTCAAGGATTAAATGAGAACTGGGAACCAATAACAGAAGTTCTCACTCTTGACGGCACAGCACAAACCACAACAAATTCATGGAAGCGTGTATTCCGTGGTTTTGTTTCAGGATCACAAGCAATCACTGCTGACTTCACATTATCTAAAAGTGGTGATGTAGTTCTTCGTATCATCACAGCACATCAGCAAACAGAGATGGCACTTTATACTGTTTGTGCTGGCAAAACTGCTTACATGACTACGATTGATGCTTCTACTTTAAAAAATGAAAGTATCACTGTAAGAATGATGCTTCGTGAATATGGTGGTGTGTTCAGATGCCGTCACGTTTTCCAAGCATCAACAGGTCAGTATAATCATGAGTTTACTATTCCAAAAGGAATTCCAGAGAAAACTGATATTGATTTAAGAGCTCTTGCTAGTAGTAATAATATTTCTGGGTATGCTTCTTTTGAACTTATTCTTGTAGATAACTAG

Tertiary structure

PDB ID
1470e55193ea349666b00fb0036a1a0b837fb6fe8436ef5c7815236901078db9
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6788
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Genome Sequence of Cyanophage Syn1 Henn,M.R., Sullivan,M.S., Osburne,M.S., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Erlich,R., Young,S.K., Koehrsen,M., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Borenstein,D., Chen,Z., Engels,R., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heiman,D., Hepburn,T., Howarth,C., Jen,D., Larson,L., Lewis,B., Mehta,T., Park,D., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., Walk,T., White,J., Yu,Q., Coleman,M.L., Huang,K.H., Weigele,P.R., DeFrancesco,A.S., Kern,S.E., Thompson,L.R., Fu,R., Hombeck,B., Chisholm,S.W., Haas,B., Nusbaum,C., Galagan,J. and Birren,B. 2011-09-23 — GenBank