Protein

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Genbank accession
AEM24777.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MPSGLLIDLRDGGPAMEITAGLRCPSYCGYSPGSNGYGTSIPIPGYVAGSTAVFSPHVTANIFASGTVLVPDIDVMAGVSQSGSNLVFSFWSNYNAKSITYKGNIWQIFPASQSSNIGLYISDSTDFTTISNGSIVGQCIYRGRVTINGSWSPPSVAGFNRQSYAVFGKWSAAGVVVEYDGNVIRAVQERNGANVNASVTMDVVIFATGSAPVPGDGLNFFNSAGQCTFSTTRRPFVYSNSYYRPSVAGVDIGDKYILLGRYGAQTDVSGGWCYAKFQGLVRSGNVVRVGRGYVANIWTSEYSVDVNKTAGVNVLLLNDMY
Physico‐chemical
properties
protein length:321 AA
molecular weight: 34097,83770 Da
isoelectric point:8,19614
aromaticity:0,12150
hydropathy:0,06729

Domains

Domains [InterPro]
IPR045604
STR
4–299
IPR045604
AEM24777.1
1 321
Architecture
STR
STR 4-299 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AEM24777.1
1 321
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0858
Central domain 11 209 200 0,0040
C-terminal 210 321 111 0,9979
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-209
C-terminal
210-321

Taxonomy

  Name Taxonomy ID Lineage
Phage Cronobacter phage ESP2949-1
[NCBI] 		2920894 Uroviricota > Caudoviricetes > Drexlerviridae > Kyungwonvirus Esp29491 >
Host Cronobacter sakazakii
[NCBI] 		28141 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AEM24777.1 [NCBI]
Genbank nucleotide accession
JF912400 [NCBI]
CDS location
range 43655 -> 44620
strand -
CDS
ATGCCTAGCGGTTTACTTATAGATTTACGTGACGGAGGGCCAGCAATGGAAATTACGGCGGGGCTTAGATGCCCCTCCTATTGCGGTTATTCTCCCGGAAGTAATGGGTATGGTACAAGCATACCAATTCCGGGATATGTTGCTGGCTCTACCGCTGTATTTTCTCCGCACGTCACGGCAAATATATTTGCTAGCGGGACGGTTCTTGTTCCTGATATAGACGTAATGGCTGGAGTTTCTCAAAGTGGAAGCAATTTGGTGTTTTCATTTTGGTCTAATTACAATGCGAAAAGCATCACATACAAGGGGAATATATGGCAAATATTTCCGGCTTCTCAGTCAAGTAATATTGGCTTGTATATATCGGACAGCACTGATTTTACTACAATTTCCAACGGAAGCATTGTCGGGCAGTGCATCTACAGGGGGCGTGTGACAATAAATGGTTCATGGTCTCCACCATCCGTGGCTGGATTTAACCGGCAATCATACGCTGTATTTGGTAAGTGGAGTGCGGCAGGTGTTGTTGTTGAATATGACGGAAACGTTATAAGGGCCGTTCAGGAAAGGAACGGGGCCAACGTTAACGCAAGCGTAACTATGGATGTGGTTATTTTTGCAACCGGATCGGCTCCGGTTCCTGGTGATGGACTTAATTTCTTTAACTCTGCCGGGCAATGCACATTCTCAACTACAAGGCGGCCATTTGTTTATTCTAATTCATATTATCGGCCATCCGTGGCGGGAGTTGATATCGGAGACAAATATATACTTTTGGGGCGGTATGGTGCCCAAACTGATGTTTCAGGGGGCTGGTGTTACGCAAAGTTTCAGGGTCTTGTCAGATCCGGTAATGTGGTGAGAGTCGGGCGCGGGTACGTGGCGAATATATGGACTTCCGAATATTCCGTTGACGTTAACAAAACCGCAGGCGTAAACGTCCTGCTTCTAAACGATATGTACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
fe955c505b42395ff620a3f514a004fddd152e6e45a0975cc624ba846e0be128
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8576
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic analysis of bacteriophage ESP2949-1, which is virulent for Cronobacter sakazakii Lee,Y.D., Kim,J.Y., Park,J.H. and Chang,H. 2012 22042210 GenBank