Protein

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Genbank accession
YP_010301536.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
Protein sequence
MDYKLFGTSAVPQLARLFAQSTADDKSCYLVKLNAGYTEADLNKCLNFQPQTGAGYMFDAALAASTGICTVIAKGTNCVRTIDRKKITVSDCALTATAEGVPTHLILGGILPVCLTVGTDVTLLYPDLNVKYDPNGYKTQISILSFNIPLANMWVENSLATWLPGNEVTAFDANAFNTGSFFDYIGNQYGMSGDVKPVANGINMGTTGVLQYNNSNIVDVSKSFTIECDYAQTSDTDFAEWQPLRYYSTLTNRSILAFDRTTEKAFVVRNNVGDSGTTKVVRDMAPYAALKTTVPVRFKYVYDAITGTHTIYIDGTQVDTFVYVMKMSNSAAFTVTGGYGSGASASCTAIIDHYSIRQGVY
Physico‐chemical
properties
protein length:361 AA
molecular weight: 39134,80320 Da
isoelectric point:5,23529
aromaticity:0,11080
hydropathy:0,01219

Domains

Domains [InterPro]
DC_0447
STR
1–180
DC_0447 IPR013320
IPR013320
STR
176–354
IPR013320
YP_010301536.1
1 361
Architecture
STR
STR 1-354 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010301536.1
1 361
Domain Start End Length (AA) Confidence
N-terminal 1 118 118 0,0022
Central domain 119 317 200 0,2452
C-terminal 318 361 43 0,9102
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-118
Central
119-317
C-terminal
318-361

Taxonomy

  Name Taxonomy ID Lineage
Phage Erwinia phage pEa_SNUABM_30
[NCBI] 		2869553 Uroviricota > Caudoviricetes > Alexandravirus >
Host Erwinia amylovora
[NCBI] 		552 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010301536.1 [NCBI]
Genbank nucleotide accession
NC_061446 [NCBI]
CDS location
range 51346 -> 52431
strand -
CDS
ATGGATTACAAGCTCTTTGGTACTTCTGCTGTGCCTCAGTTAGCGCGTCTGTTTGCTCAATCAACTGCGGACGATAAGTCCTGCTATCTGGTTAAGCTGAATGCAGGCTATACCGAAGCCGACTTAAACAAGTGCCTAAACTTCCAGCCTCAGACTGGTGCAGGTTACATGTTTGACGCGGCGCTTGCTGCTTCGACTGGCATCTGCACTGTGATCGCTAAAGGCACAAACTGCGTCCGCACAATCGACCGTAAGAAGATTACAGTGTCTGACTGCGCTCTTACTGCTACGGCTGAGGGTGTACCGACACATCTGATTCTCGGCGGCATTCTGCCTGTGTGCTTGACTGTAGGAACGGACGTAACTCTGCTTTACCCTGATCTGAACGTTAAGTACGACCCGAACGGATATAAGACGCAGATTTCTATTCTGTCGTTCAACATCCCGCTGGCCAACATGTGGGTTGAGAACTCACTCGCTACTTGGCTGCCTGGCAATGAAGTTACTGCATTCGATGCCAATGCGTTCAATACTGGTTCGTTCTTTGACTACATAGGCAACCAATATGGCATGTCTGGTGACGTTAAGCCTGTGGCGAATGGCATCAACATGGGCACCACCGGTGTGTTGCAATACAATAACAGCAACATCGTTGATGTAAGCAAGTCATTCACCATTGAGTGTGACTACGCTCAAACGTCAGATACGGACTTTGCTGAATGGCAGCCTTTGCGTTACTATTCGACTCTGACCAACCGCAGCATCTTAGCGTTTGACCGCACTACAGAGAAAGCCTTTGTTGTGCGTAATAACGTTGGCGATAGCGGTACAACGAAAGTCGTGCGCGATATGGCTCCGTATGCTGCGCTAAAAACTACCGTGCCTGTTCGCTTCAAGTACGTGTATGACGCAATTACAGGTACACATACGATCTACATTGACGGCACTCAGGTTGATACCTTTGTGTACGTGATGAAAATGTCCAACAGCGCTGCGTTCACTGTTACTGGTGGCTACGGTTCTGGTGCGTCTGCCTCATGCACAGCCATCATCGATCACTACAGCATTCGTCAAGGAGTCTACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f36ab3b093e46b9c8fb205780f02e8987db6e859bdd818c406f6423056cd0017
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5836
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Erwinia phage pEa_SNUABM_30 Kim,S.G. and Park,S.C. 2021-01-07 — GenBank