Protein

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Genbank accession
GENB_0a0727ac5c65 [GenBank]
Protein name
tail spike protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MARTVPGSGAQIKPIFDEVFGVRAVEVLDGGSGYDSSDPPRLTITGCGTPVQEALLYPIIDDDSGRIVHVRVLEKGSGYDPLRLSILPTAETPNVVPSFDVNRVWQRDPNSATQGVFASTTDRLTITSDNHPKPADIAAERAPGGGPLVDRAFNQEFIYRGGKDVPYVGDRPFQSNKSVGILANGGLLHTPDWGAAGNPPAGFTFDAVKNTYLKSIDQYGAVTDSNVYYYHTSKAINHFALSNGVFENGFLRQFVWQVRVEYDNVLLPISDVDETLGSVEVGRIVEEIGGNAAGTIAKIVRDGNGDITRVYLRLVSNTFQTGDKLLGTNGFVITVSDTPILFPNGLFYINFGEDAAEFGNFISNQFYLAPENIQVQRNYQIIWDSSHISNQPSDLHTHGHPMQFSTTADGTLNSGTLYYNSTGASGAMAADYENVFRPSFIMNADESNRIYYYCQYHRYMSGYEGDEGYMVLSPTVDNDPLVNNYYITDFYNDGGTPDYSRHANGHSKIIGMSFDGYPIYGPYGYLPNGSIGRLNTSFRLKTGVEIDGNRPKQTTAGTVTYTVTVSNNKFLFDGADPDFLALDRGKTYVFNQDDASNNDKYLLISATEDGWHSGTPDIGNTSLLYQDGVTYYLDGSETTYSNYISLFNSSAQREIRFTPRVDSPTALYNFAYSTSGYGKRSVQEGYIMGDLTQDYIFDATEGELDAFNGKFAITPEYPNGTYAYFMCEDSSGNPEYPYAIGPQFYGAPYFEGDALPDVPTEFPSGAEGEVFLNDNGEVSFVKINKNGDGYFGPAQAKILGGGGSGATASPVVQTVTGLVLLNPGRSFQTPPTLIFEGGGGQDASGRAQIDTTGRVTSISVANAGEFYETAPYVLINGGGGLGAKAVATIDQGQVTGITVTDPGRGYTSAPSIIFNKLINLKRKTAARQSLNSSFFYLTGLLKNVTASDDVIYVDDTDSFPGSGTLILNNEIITYASKSRERFSGLTRGTNFNYDQRVILDTGQNDQAGVSTYEYNVGDRVIRKIENANNKIAKVYDWNPNNRELLVTFEVDELAFIDAGTPSTEDATVQFDAGVADSANSNFQPHVLVTTVGSNIITLTDPIATLQDRSFEDDDEDGGNGDGIPDLVNTGTDFENQISLDGGIYNSLYGIEETVGGQNTTLFQVGDQIKDSSLPFKFATIIEAGALSEGRPQVATAQIYIDGNFGNGQNYSVNEIVTGAVSGVTATVVSWDTVNGILTVNDITPYNTGNVNIGVAGYLYKFSDSSTIVDFIVSNPGTNYSAVPTIAVENNADIEVTTTAVMTTAGDQISSVNITSGGYGYTKYVDNTYATRPTVTVTRAGSDTTGSGAELEVILGGENIVGNGGASYRIKKIVYGTEVRSQ
Physico‐chemical
properties
protein length:1381 AA
molecular weight: 148915,89780 Da
isoelectric point:4,42329
aromaticity:0,10862
hydropathy:-0,29341

Domains

Domains [InterPro]
DC_0042
ATT
3–87
DC_0042 IPR025924 IPR025924 DC_0832
DC_0832
ATT
80–1015
DC_0832
GENB_0a0727ac5c65
1 1381
Architecture
ATT
ATT 3-1379 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
GENB_0a0727ac5c65
1 1381
Domain Start End Length (AA) Confidence
N-terminal 1 121 121 0,9790
Central domain 122 450 330 0,2773
C-terminal 451 1381 930 0,0219
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-121
Central
122-450
C-terminal
451-1381

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage MS29
[NCBI] 		2995680 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
OP807803.1_CDS_[37824..41969] [NCBI]
Genbank nucleotide accession
OP807803.1 [NCBI]
CDS location
range 37824 -> 41969
strand +
CDS

  




        

        
      
    
  






  

  
  

    
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Tertiary structure


  



  

    

      
        
          
            
              

                

                  

                    

                      
PDB ID

                      
4515e7bf03ed938fd2fa12946e43c70bc77c1c826c6bc3520f846b68c0844866

                    

                    
                      ColabFold
                    
                  

                  

                  

                    

                      Source
                      ColabFold
                    

                    

                      Method
                      ColabFold
                    

                    

                      Resolution
                      0,8380
                    

                    

                      Oligomeric State
                      monomer
                    

                    
                  

                  

                    
                      Download PDB
                    
                  

                  
                  
                  
                

                
                
                

                  

                    
                      
Model Confidence

                      

                        

                          

                          Very high
pLDDT > 90
                        

                        

                          

                          High
90 > pLDDT > 70
                        

                        

                          

                          Low
70 > pLDDT > 50
                        

                        

                          

                          Very low
pLDDT < 50