Protein

View in Explore
Genbank accession
XWX31056.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,87
TF
Evidence Phold
Probability 1,00
Protein sequence
MVNSMFGGDLDPYEKSLNYEYPYHPSGNPKHIDVSEIDNLTLADYGWSPDAVKAYMFGITVQNPDTGQPMGDEFYNHILERAVGKAERALDISILPDTQHEMRDYHETEFNSYMFVHAYRKPILQVENLQLQFNGRPIYKYPANWWKVEHLAGHVQLFPTALMQTGQSMSYDAVFNGYPQLAGVYPPSGATFAPQMIQLEYVSGMLPRKKAGRNKPWEMPPELEQLVIKYALKEIYQVWGNLIIGAGIANKTLEVDGITETIGTTQSAMYGGASAQILQLSDDIKEILEGLRAYFGYNMIGL
Physico‐chemical
properties
protein length:302 AA
molecular weight: 34107,32570 Da
isoelectric point:5,01396
aromaticity:0,11921
hydropathy:-0,33477

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage PG-2021_19
[NCBI] 		2815618 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XWX31056.1 [NCBI]
Genbank nucleotide accession
MZ417322.1 [NCBI]
CDS location
range 7908 -> 8816
strand +
CDS
ATGGTTAACTCAATGTTCGGAGGGGACTTAGACCCTTATGAGAAATCATTAAACTATGAATATCCTTATCACCCATCAGGTAACCCTAAACATATAGATGTAAGTGAGATAGATAACTTAACATTAGCTGATTATGGGTGGTCACCGGATGCAGTTAAAGCTTATATGTTCGGTATCACAGTACAAAATCCTGATACAGGACAACCTATGGGTGATGAGTTTTATAATCACATATTGGAAAGAGCAGTAGGTAAAGCCGAGAGAGCTTTAGATATATCTATATTACCTGACACACAACATGAGATGAGAGATTATCATGAGACAGAATTTAATAGTTATATGTTTGTACATGCGTACAGAAAACCTATTTTACAAGTAGAAAACCTGCAACTACAGTTTAATGGGAGACCTATATATAAATACCCTGCTAACTGGTGGAAAGTAGAGCACCTAGCAGGACATGTACAGTTATTCCCAACAGCACTAATGCAAACAGGACAATCAATGTCATATGATGCTGTATTTAATGGGTACCCGCAATTAGCAGGTGTATACCCACCATCAGGAGCAACATTTGCACCTCAGATGATACAGTTAGAATATGTATCCGGAATGTTGCCACGTAAAAAAGCAGGAAGAAACAAGCCATGGGAAATGCCTCCTGAATTAGAACAATTAGTTATAAAATATGCACTGAAAGAGATATATCAAGTATGGGGTAACCTAATTATTGGTGCCGGTATTGCTAATAAAACATTAGAAGTAGATGGCATTACAGAAACAATTGGTACTACACAATCTGCCATGTATGGTGGGGCTAGTGCTCAAATACTTCAACTCAGTGATGATATAAAAGAAATACTAGAGGGATTAAGAGCTTATTTCGGATATAATATGATAGGATTATAA

Tertiary structure

PDB ID
1e17d628c230c14a4a89608a31c404f7b84bd8c21ac0d5b33cd640cea36dd8d0
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7554
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Natural phage communities crosslink different species within the genus Staphylococcus Goller,P.C., Elsener,T., Lorge,D., Radulovic,N., Bernardi,V., Naumann,A., Amri,N., Khatchatourova,E., Hernandes Coutinho,F., Loessner,M.J. and Gomez-Sanz,E. 2024 — GenBank