Protein

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Genbank accession
AGC34666.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MSDYRDDSNDTAVISDKTWLGLTAISEGTARVSETVLYGLLVLHTDSAAVSDETMDRPAHLLVDQAAISDAAGDQLRGRVLVVETVTAADRVTGTLRVLHTDGATASDAVLEHVRSLAVDGATVADEVLGTRHAFTLVLDAARISDSTGQSASVLVEDVATASDQASGTLHGRVLLVDGASLTDQVMDAHQVVQALLVDGASIAALVLDHLAARDLVSDAVVIEDITVGGDQDGGQAWTANVDSWAMSRYAPYTFRSLAVIDGRLYGIAEDGVYALDDDSQPVAGRIATGKLDIGQGALVHPHSAYLEYELDADGTVAMDVTTTQRGSDATYSYPLESEPADELTNGRFKFGRGLRGRHFTFTLRLTGRHAYINDLSVQSAPTNRRV
Physico‐chemical
properties
protein length:387 AA
molecular weight: 40992,86980 Da
isoelectric point:4,52043
aromaticity:0,05168
hydropathy:-0,03359

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AGC34666.1
1 387
Domain Start End Length (AA) Confidence
N-terminal 1 367 367 0,8629
Central domain 368 376 10 0,0015
C-terminal 377 387 10 0,9952
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-367
Central
368-376
C-terminal
377-387

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage H66
[NCBI] 		2928683 No lineage information
Host Pseudomonas aeruginosa HIM-6
[NCBI] 		29322 Bacillota > Clostridia > Eubacteriales > Eubacteriaceae > Eubacterium >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AGC34666.1 [NCBI]
Genbank nucleotide accession
KC262634 [NCBI]
CDS location
range 42421 -> 43584
strand +
CDS
ATGAGTGACTACCGCGACGACTCCAACGACACAGCGGTGATCAGCGACAAGACCTGGCTGGGGCTGACCGCCATCAGCGAAGGGACCGCCCGCGTCAGCGAGACGGTGCTCTACGGCCTGCTAGTGTTGCACACCGACAGCGCCGCGGTGTCGGACGAAACCATGGATCGACCGGCACACCTACTGGTCGACCAGGCAGCAATCAGCGATGCGGCCGGCGACCAACTCCGTGGCAGGGTGCTGGTGGTCGAGACGGTCACGGCGGCAGATCGGGTTACCGGCACCCTGCGCGTCCTGCACACTGATGGCGCCACAGCGTCGGATGCGGTGCTGGAGCACGTGCGTAGCCTGGCGGTGGATGGCGCGACGGTAGCGGACGAGGTGCTAGGTACCCGCCATGCGTTCACTTTGGTACTGGATGCCGCGCGCATAAGCGACAGCACCGGTCAGTCCGCCAGCGTGCTGGTGGAGGACGTTGCCACCGCGAGCGACCAGGCAAGCGGAACGCTGCATGGTCGTGTTCTGCTGGTGGACGGGGCCTCCCTTACCGATCAGGTGATGGATGCGCACCAGGTGGTGCAGGCGCTGCTGGTGGACGGAGCGAGCATTGCCGCGTTGGTGCTGGACCACCTGGCGGCGCGTGACCTGGTATCGGATGCCGTGGTGATCGAGGACATCACGGTGGGTGGTGACCAGGACGGCGGCCAGGCCTGGACCGCAAACGTCGATAGTTGGGCGATGAGCCGCTACGCACCGTATACCTTCCGGTCGCTTGCTGTAATCGACGGTCGGCTGTACGGCATCGCCGAAGACGGCGTTTACGCGCTGGACGATGACAGCCAGCCGGTGGCCGGCAGAATCGCGACCGGGAAACTGGACATCGGCCAGGGCGCGCTGGTGCATCCGCATAGCGCCTACCTGGAGTACGAACTGGATGCTGATGGCACGGTGGCCATGGACGTGACCACCACGCAACGCGGCAGTGACGCCACCTACAGCTACCCGCTGGAGAGCGAGCCAGCAGACGAGTTGACCAACGGGCGCTTTAAGTTCGGCCGGGGCCTGCGCGGCAGGCACTTCACCTTCACGCTGCGCCTGACCGGCCGGCACGCCTATATCAATGACCTGAGCGTCCAATCGGCGCCGACCAACAGGAGAGTGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
4e517952304f72ac5d87a983b631534b5261051c10524ad98cf6044902a956ee
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4978
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Pseudomonas aeruginosa temperate bacteriophage H66 Maya,O., Flores,V. and Guarneros,G. 2012-04-24 — GenBank