Protein

View in Explore
Genbank accession
ACP41754.1 [GenBank]
Protein name
putative receptor-binding protein
RBP type
TF
Evidence RBPdetect
Probability 0,85
Protein sequence
MACKNCNKSVIDPNLRSTISNTGCDCEVHTESDSPEKLVLDETRLSRRVDSNRAMVVSVNGKSIMAIVDRFIEYTRCLIRNIITHVVNLDKRVTRLEGNGGDLTPVKKEFDAGYMYNWTMYRIGNTVFVAAEGRQIATSPANQEWTLMPNKVPEGFRPIQSCQVLSFAQTKAQTTVQRQILPDGVIHYLSINGIEANTWVITPSTSWLTNDKYPTTN
Physico‐chemical
properties
protein length:217 AA
molecular weight: 24389,50440 Da
isoelectric point:8,20310
aromaticity:0,06912
hydropathy:-0,33733

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Lactococcus phage P087
[NCBI] 		641487 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Lactococcus lactis
[NCBI] 		1358 Bacteria > Firmicutes > Bacilli > Lactobacillales > Streptococcaceae > Lactococcus

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ACP41754.1 [NCBI]
Genbank nucleotide accession
FJ429185 [NCBI]
CDS location
range 50243 -> 50896
strand +
CDS
ATGGCATGTAAAAATTGTAATAAGAGTGTGATTGACCCTAATCTACGCTCTACTATCTCAAATACTGGTTGTGACTGTGAGGTTCACACTGAATCAGATAGTCCTGAGAAGTTAGTTCTTGATGAAACTAGATTAAGTCGTCGTGTTGACTCAAACCGTGCTATGGTGGTTTCTGTTAATGGTAAATCCATTATGGCTATTGTTGACAGATTTATTGAATATACTCGTTGTTTAATTCGTAATATTATCACCCATGTTGTTAATCTGGATAAACGTGTAACTCGTTTAGAAGGTAATGGTGGTGATTTGACTCCAGTCAAAAAAGAGTTTGACGCTGGTTACATGTACAATTGGACTATGTATCGTATTGGTAATACAGTTTTTGTAGCTGCTGAGGGACGACAAATTGCTACTTCTCCTGCTAATCAAGAATGGACATTAATGCCAAACAAAGTCCCAGAGGGATTTAGACCCATTCAATCTTGTCAAGTACTTAGTTTTGCTCAAACCAAAGCTCAAACAACGGTACAACGTCAAATTTTACCAGACGGTGTTATTCATTATTTATCAATTAATGGTATTGAAGCAAACACTTGGGTGATTACACCATCAACATCTTGGCTTACTAACGATAAATATCCAACAACTAATTAA

Tertiary structure

PDB ID
2f8cb358374cea7a5c7e08d37adce1905c24231e793727342f1b33500d5b4e9b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7083
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
P087, a lactococcal phage with a morphogenesis module similar to an Enterococcus faecalis prophage Villion,M., Chopin,M.C., Deveau,H., Ehrlich,S.D., Moineau,S. and Chopin,A. 2009 19349056 GenBank