Protein

View in Explore
Genbank accession
YAA50745.1 [GenBank]
Protein name
capsid and scaffold protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MILEGVYPSFLKGVSQQTPQERNDGQLGAQLNLLSDAVTGLRRRGGVKFQTKLAGIPNSSYIRLIDINGVNYIMIVDTVTGTLKIYNFDGYLLKAHQTDYLKASNGKASIRSTVSRNNCFILNTEQVITKTPTGGTNPTPNPSTMGYISIRSGQFSKMYSVDIKSGSYTLSFGVGTSGREAWQATPEWVATKIESRIKADATLNARYDVVREGSTVALKAKSATDTNLLVIESGTGSTYIQTSNSSRVQGKQDIIANLPNILDKYIIAVGTVGNSAYYQYNADSSTWKECGVYEEPYKFTNEPIYWYFDDTATIQVKSLDIQPRAAGDDDNNPLPKFVDFGITGISAYQSRLVLLSGSYVNMSATADFNVYMRTTVEELQDDDPIEVSSTALSAAQFEYAVPYNKDLVLLAQNQQAVIPANSTVLTPKTAVIYPSSKANISMASEPQVVSRSLYYTYQRGTDYYQVGEMIPNAYADAQYYAQNLADHIPLYATGVCTSITGSTTDNMAVFSSDQKELLVHQYLWAGEDRPLMSFHKWELPYDVLHVQFLQEYLVLFMDVGDDLVVGTINVQLNQLDNKPIPFLDIYQYVDIIDGEGTLPEFLPEGELVAAVYSSETMRHAKVQYEIEGTKIKCQFNGRIYLGVPYESSLTLTPPFVKDDKGRVVAGSNSTVVDLNMTFKSTGEFEYHVSDTYGDVFDGETSAQAWSETQLGYTRVNTVSDVKFPCGTLLSSTEFSIRTKGTTELNIISASYNIRVPNRGRRRL
Physico‐chemical
properties
protein length:763 AA
molecular weight: 84483,81670 Da
isoelectric point:4,99668
aromaticity:0,10354
hydropathy:-0,25662

Domains

Domains [InterPro]
DC_0058
STR
1–763
DC_0058
IPR058003
TTP
7–761
IPR058003
YAA50745.1
1 763
Architecture
STR
STR 1-763
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YAA50745.1
1 763
Domain Start End Length (AA) Confidence
N-terminal 1 131 131 0,9818
Central domain 132 330 200 0,1192
C-terminal 331 763 432 0,2137
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-131
Central
132-330
C-terminal
331-763

Taxonomy

  Name Taxonomy ID Lineage
Phage Acinetobacter phage AB_PAG_240411
[NCBI] 		3458987 Viruses >
Host Acinetobacter baumannii
[NCBI] 		470 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Moraxellales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YAA50745.1 [NCBI]
Genbank nucleotide accession
PX097700 [NCBI]
CDS location
range 991 -> 3282
strand +
CDS
ATGATTCTTGAGGGAGTGTACCCGTCATTCTTGAAAGGTGTATCACAGCAAACACCTCAAGAGCGTAATGACGGACAATTAGGCGCACAGCTTAATTTATTATCTGATGCTGTAACAGGTTTACGTAGACGTGGTGGGGTTAAATTCCAAACCAAGTTAGCAGGTATTCCTAATAGTAGTTATATACGCTTGATTGACATCAACGGTGTTAATTATATTATGATCGTAGATACTGTTACAGGCACTTTAAAGATTTATAATTTTGATGGTTACTTACTTAAAGCACATCAAACAGATTATCTTAAAGCCTCCAACGGTAAGGCTAGTATCCGCAGTACAGTCTCACGTAATAATTGTTTTATATTAAACACTGAACAAGTTATTACTAAGACACCTACAGGCGGTACTAACCCAACACCTAATCCAAGTACAATGGGTTATATCAGTATTCGTTCTGGTCAGTTCTCTAAGATGTATTCAGTAGACATCAAATCAGGTTCTTATACCTTAAGTTTTGGTGTAGGTACATCCGGTCGCGAGGCATGGCAGGCTACTCCTGAATGGGTAGCTACTAAGATAGAGAGTAGGATTAAAGCAGACGCTACTCTTAACGCACGTTATGACGTTGTACGAGAAGGTAGCACAGTTGCACTTAAAGCTAAATCTGCTACAGATACTAACTTATTAGTAATAGAATCTGGTACAGGTAGTACTTATATTCAAACTAGTAATTCTAGTCGTGTACAGGGTAAGCAAGACATTATTGCTAATCTACCTAATATCTTAGATAAGTATATTATTGCAGTAGGTACAGTAGGTAATTCAGCTTACTATCAATATAATGCGGACTCTAGCACTTGGAAAGAGTGTGGTGTATATGAAGAACCATATAAGTTCACTAACGAACCTATTTACTGGTACTTTGATGATACTGCTACTATCCAAGTTAAAAGCCTAGATATTCAACCACGTGCAGCAGGTGATGATGATAATAACCCATTACCTAAGTTTGTGGATTTTGGTATTACAGGTATTAGTGCATACCAATCACGTTTAGTACTACTTAGTGGTTCCTATGTTAATATGAGTGCTACAGCAGACTTCAACGTATATATGCGTACTACTGTAGAGGAATTACAGGATGATGATCCAATTGAGGTATCTAGTACCGCTTTGAGTGCTGCACAATTTGAATATGCTGTTCCGTATAATAAAGATTTAGTTTTATTAGCCCAGAACCAACAAGCTGTTATCCCAGCCAATAGTACCGTACTTACACCTAAGACGGCTGTTATCTACCCAAGTTCAAAAGCTAATATTAGTATGGCTAGTGAGCCACAGGTAGTGTCTCGTAGTTTGTATTATACATATCAACGAGGTACAGATTATTATCAAGTTGGTGAGATGATTCCTAATGCTTATGCAGATGCTCAGTACTATGCACAGAACTTAGCAGACCATATTCCGTTATATGCTACGGGTGTTTGTACTTCAATCACAGGTAGTACTACAGATAATATGGCGGTATTTAGTTCGGACCAGAAAGAGTTACTTGTACATCAGTACTTATGGGCAGGTGAGGACCGCCCGTTAATGAGCTTCCACAAGTGGGAGTTACCGTATGATGTACTACATGTGCAATTTCTACAAGAGTATTTAGTATTGTTTATGGATGTGGGTGATGATTTAGTGGTTGGTACTATTAACGTACAGTTAAACCAGCTAGACAATAAACCTATCCCATTCTTAGATATTTACCAATACGTAGATATTATAGACGGGGAAGGTACATTACCTGAGTTCCTACCAGAAGGTGAGTTAGTAGCTGCGGTATACAGTTCTGAGACTATGCGTCATGCTAAGGTTCAATATGAAATTGAAGGTACTAAGATTAAATGTCAATTCAATGGGCGTATTTATCTAGGTGTACCTTACGAAAGTTCACTCACACTAACACCGCCTTTTGTTAAAGACGATAAAGGTCGAGTAGTTGCTGGAAGTAATAGTACAGTAGTTGATCTTAATATGACATTCAAAAGTACAGGTGAGTTTGAGTACCATGTTTCTGATACCTATGGTGATGTATTCGATGGTGAAACATCTGCACAAGCTTGGTCAGAAACACAACTAGGGTATACGCGAGTAAATACAGTTAGTGATGTTAAGTTCCCTTGTGGTACGTTATTGAGTTCGACTGAGTTCAGTATCCGTACTAAAGGTACAACTGAGTTAAACATCATTAGTGCTAGTTACAATATCCGTGTACCGAACAGAGGACGGAGACGTTTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
53df230d87680eda08caffb74034a4a4acdc5d1e589d714983dbbbc9653e9a09
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8824
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50