Protein

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Genbank accession
XPK41062.1 [GenBank]
Protein name
membrane protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MGAGILIDYNDGRPVMEITAGLRAPSFCTTFNQRCQSDKTLSINTPLTPGSELVVALTNPVEVIEVFDQTLVLPDPFYVTSIQRNGDGGITLRGEDAYNAYSGLPTWGGVIMEVLPVGSRNAGLLVANSTDFTAISNVSRLMTCRYAQRVHVNGSMPLPVGGVPFARWDDGNVSVGFDGGSIIVRNASYGGIDDVGAAVDMDLVIFNNTPPSPGTGITMTNNQGQVTFSTVNKPFVYDRTINIGGGDQHIGNSLIQLSYTGALIENNGGYNHVRMNGIRMAGNNVRIAKNRVIGNYSRQQFQMPGKNIAVPTPLLVIPNIY
Physico‐chemical
properties
protein length:321 AA
molecular weight: 34359,53900 Da
isoelectric point:5,60418
aromaticity:0,07477
hydropathy:-0,03614

Domains

Domains [InterPro]
IPR045604
STR
4–297
IPR045604
XPK41062.1
1 321
Architecture
STR
STR 4-297 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XPK41062.1
1 321
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,5855
Central domain 11 208 199 0,0060
C-terminal 209 321 112 0,9969
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-208
C-terminal
209-321

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage Haito_Bas83
[NCBI] 		3398413 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XPK41062.1 [NCBI]
Genbank nucleotide accession
PQ850604 [NCBI]
CDS location
range 21022 -> 21987
strand -
CDS
ATGGGTGCCGGAATATTAATCGACTACAACGACGGTAGACCTGTCATGGAGATAACCGCGGGCCTTCGCGCTCCGTCGTTTTGCACTACCTTTAATCAGCGCTGTCAGTCTGACAAGACGCTGTCCATTAACACACCGCTGACACCAGGGTCCGAACTGGTCGTTGCCCTAACTAATCCGGTTGAAGTGATTGAGGTATTCGACCAGACCCTGGTCTTGCCAGACCCGTTTTATGTGACGTCGATACAACGTAACGGGGATGGCGGAATCACCTTGCGCGGTGAGGACGCCTATAACGCATACAGCGGGCTTCCAACATGGGGCGGGGTGATTATGGAAGTGCTGCCGGTGGGGTCACGCAATGCGGGCTTACTGGTGGCTAACTCAACGGACTTCACCGCCATATCCAACGTATCACGGCTAATGACGTGCCGATATGCGCAGCGCGTGCATGTAAACGGAAGTATGCCGCTACCAGTCGGCGGTGTCCCGTTCGCGCGCTGGGACGACGGCAACGTATCGGTTGGCTTCGATGGCGGAAGTATCATTGTCCGTAATGCGTCCTATGGCGGGATTGACGACGTAGGCGCTGCCGTTGATATGGACCTGGTCATATTCAACAATACGCCGCCCTCACCGGGGACCGGTATCACCATGACTAACAACCAGGGGCAGGTCACGTTCTCGACGGTAAACAAGCCGTTTGTCTACGACCGAACGATTAATATCGGTGGCGGCGACCAGCACATCGGTAATAGTCTGATCCAGCTTTCATATACCGGTGCGCTCATTGAGAACAACGGAGGCTATAACCATGTGCGCATGAACGGGATACGAATGGCGGGTAATAATGTGCGCATCGCTAAAAACCGCGTTATTGGCAACTACTCACGGCAGCAATTCCAAATGCCGGGCAAAAATATTGCCGTACCCACCCCGCTATTAGTCATCCCTAACATCTATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
61cf6074500bf9e4d08e6019db594be8b8487e4c5196ca24254f597e22512b21
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8276
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequences of Escherichia coli phages Huey, Dewey, and Louie Maffei,E., Willi,L. and Harms,A. — — GenBank