Protein

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Genbank accession
YP_009813542.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,90
TF
Evidence Phold
Probability 1,00
Protein sequence
MASQAIYVDALRLTSVGEQAVSTANAGGIVVKPVAFKVGDFTGSQPSAVPSQLLGNELASGQLSFVQVESENSARFVFDVSLDYKNNEEIKSIGEILIMLEDNRAFGHVVLSNPIMVVPNSAARISLLVHLKQDIQRILDVTMYDYATIPSVATLENLPASNDNHFNAVSVLDLHVNSDGSRSPGTAFRYGPGGYNWGFGEHDRVLSKVIGADFINANTFNTSLKLAQDEIVLVQTISGPGAGACRHFKYRNGQLINQDKAIPFISSATTIAVWKRIVNPIVPTAGIPWPEDNDVPAAWALFRGEGNKLYWGPIAGGNRQTTATLFTPPGKLLFSSLVTTGSTDAITYALSEELDSATDLLLGTSGVLQPRTAYEVRKKEMALSENLPNAMTLDLRQFRLEPSQGHVVLFEAYDFTGDGQTSDFKLGNAPVDDADHVFAVVGNTWQPTTVYKLNNGNRLKFVDSIPSGHKVSLYAARYEERAGWSTRIRVATFKLPYATDTFELPITPLNKAHVIANMGGLPAHTSDFTLVGSTIRFSTQVKANTTVEFTIFENVKSVGSKDTNIEGVIVDVIATPTGYMFKRQGMTPLSVPLFTPDIIAGKGIKIEGVWPFVKIHSIAAMAEAEDPKAIFNIQNRVEDSEEIIIRQRIEFNKGVVITATADFQAQLGPGFAVAIGNEHIEFVLASASPGSDAPEYGRGVKGTGAAGLAVVNPNSTESIAYGNASITQMYDLIRDNHPAGYVEIVAKMRISNAMIGNYASKLIANLCIKVEPR
Physico‐chemical
properties
protein length:773 AA
molecular weight: 83521,71020 Da
isoelectric point:5,56621
aromaticity:0,08409
hydropathy:-0,02962

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Dickeya phage vB_DsoM_JA11
[NCBI] 		2382310 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009813542.1 [NCBI]
Genbank nucleotide accession
NC_048077 [NCBI]
CDS location
range 65766 -> 68087
strand -
CDS
ATGGCATCACAAGCAATTTATGTTGATGCGCTTCGGCTAACGTCTGTCGGGGAACAAGCAGTCTCTACCGCCAACGCAGGTGGAATTGTAGTAAAACCTGTCGCTTTTAAAGTCGGCGATTTTACTGGTTCTCAGCCTAGCGCAGTACCTTCGCAGCTTTTAGGAAACGAGCTTGCTTCCGGACAACTTTCTTTTGTTCAGGTGGAAAGTGAAAACTCCGCGCGTTTTGTTTTCGATGTTTCGCTGGATTACAAAAACAACGAAGAGATTAAATCAATCGGTGAAATTCTCATCATGCTCGAAGACAATCGTGCCTTCGGGCATGTTGTGCTTTCTAATCCGATCATGGTGGTTCCAAACAGCGCAGCGCGAATCAGTTTACTCGTTCACTTAAAGCAAGACATTCAACGAATTCTTGATGTGACGATGTATGACTATGCAACTATTCCGTCTGTTGCAACGCTTGAGAATTTGCCAGCCTCTAATGACAATCATTTTAACGCGGTTTCTGTTCTCGATTTGCATGTGAATAGTGACGGTTCTCGTTCTCCCGGTACTGCATTCCGTTATGGCCCCGGTGGTTATAATTGGGGATTCGGCGAGCATGATCGCGTGCTGTCAAAAGTAATCGGCGCTGATTTTATTAACGCAAATACTTTCAATACAAGTTTGAAACTGGCGCAAGATGAAATTGTGTTAGTTCAGACTATCAGTGGCCCCGGTGCTGGCGCGTGTCGTCATTTCAAATATCGCAACGGACAACTGATCAATCAGGATAAAGCGATTCCGTTTATCAGTAGCGCAACAACAATCGCAGTGTGGAAGCGCATTGTGAATCCGATTGTTCCGACTGCTGGTATTCCGTGGCCGGAAGATAACGATGTTCCCGCTGCATGGGCTTTATTTCGCGGTGAAGGAAATAAACTTTATTGGGGGCCAATCGCAGGCGGTAACAGACAAACTACTGCAACGCTTTTTACGCCTCCGGGAAAACTTCTGTTTAGTTCTCTCGTAACGACTGGTTCCACTGACGCAATCACTTATGCTCTTTCCGAAGAATTGGACAGCGCAACGGATTTATTGCTTGGCACCAGTGGCGTATTGCAGCCGCGCACCGCATACGAAGTTCGCAAAAAAGAAATGGCACTTTCAGAAAACTTGCCTAACGCAATGACTCTGGATTTACGCCAATTCCGTTTGGAACCGTCGCAAGGTCACGTTGTTCTTTTCGAAGCGTATGACTTTACTGGCGACGGGCAGACGAGTGATTTTAAACTTGGCAACGCTCCTGTCGATGATGCGGATCATGTGTTCGCTGTTGTTGGAAATACGTGGCAACCGACTACCGTTTATAAATTGAATAACGGAAACCGTTTGAAATTTGTAGACAGTATTCCTAGCGGTCATAAAGTTTCGTTGTATGCTGCACGCTACGAAGAACGTGCCGGATGGTCTACTCGTATTCGCGTTGCAACTTTCAAACTTCCTTACGCGACGGATACGTTTGAGCTTCCAATTACTCCGCTGAACAAAGCGCACGTAATTGCGAACATGGGTGGTTTGCCTGCGCACACTTCTGATTTTACTCTGGTTGGAAGCACGATTCGTTTTTCAACTCAGGTAAAAGCAAACACAACTGTTGAATTCACGATTTTCGAAAACGTTAAAAGTGTTGGCAGCAAAGACACAAACATCGAAGGCGTTATCGTTGATGTGATTGCAACTCCTACCGGATACATGTTCAAACGTCAGGGCATGACTCCGTTAAGTGTTCCGCTGTTTACTCCTGATATCATCGCCGGGAAAGGAATTAAAATTGAAGGCGTTTGGCCTTTCGTTAAAATTCATTCCATTGCGGCAATGGCAGAGGCAGAAGATCCGAAAGCAATTTTCAACATTCAAAACCGTGTTGAGGATAGCGAAGAGATCATTATTCGTCAGCGCATCGAATTCAATAAAGGCGTTGTGATTACTGCTACTGCTGATTTTCAGGCGCAGTTAGGGCCAGGTTTTGCTGTTGCAATTGGTAACGAGCATATCGAGTTTGTTCTTGCTTCTGCTTCTCCGGGTTCTGATGCTCCTGAATACGGGCGTGGCGTGAAAGGTACTGGTGCTGCTGGCCTTGCAGTTGTGAACCCAAACAGCACGGAATCTATTGCTTATGGGAACGCAAGCATTACGCAAATGTACGATTTGATTCGCGATAATCATCCGGCAGGTTATGTTGAGATCGTTGCGAAAATGCGTATCAGCAATGCGATGATCGGAAACTACGCATCAAAACTTATTGCTAATCTTTGTATTAAGGTGGAACCGCGATGA

Tertiary structure

PDB ID
89528c97a2b687543dbeb10266862c1c2cf4d26088913a0af367167e2d90244f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5553
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Jumbo bacteriophages are represented within an increasing diversity of environmental viruses infecting the emerging phytopathogen, Dickeya solani Day,A.W., Ahn,J. and Salmond,G.P.C. 2018 — GenBank