Protein

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Genbank accession
CAB4152108.1 [GenBank]
Protein name
Pectate lyase superfamily protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MAVNLSPIAGAGWQFFDNDGRPLSGGLLYTYAAGTSTPLATYTTANGNIANSNPIVMDAAGRPPQEIWLTDTFAYKFVLKDANSVLIATWDNITGINSNFQAFALQDETQTATQGQTVFTLTGFVYQPSTNSISVFVNGSKQISGTNYAETSPSVVTFADGLNVGDIVEFTTAVPVSTNPIDASQVTYLPGGTDAVATNVQDKLRQTVSIKDFGAVCDGTTNDTVAVQNAISSIGSGDVSLIIPGPTKINANLTFSGNTQLDFSQGGMFIGTAGTEVIIVTKLNANIQQIFSNCKPISTTGITVYPEWFGAVKDGTTDDQPAFALAIEYLKNVGGIIQLQSGHYAIDNPIEVLYNHITIQGAGNNVSWIDVTSPSVNGIEIVGVSGTPIRNVMLRDFSIISDTFGSSNVGITMFYTAFVIVERMQIHDFIIGVYMKGAGNTQLDTIGATYTGTNNGFVGFNIYGGVSASDGNPSSNFRRCYTSGVTGKTGQIGFRIYGVYMSDLQFELCETALTNYGYVIDYTSAPNYNVDIIIRNPIVDRYFAQGILVNALPANGMLQIIGGYTNPDTLGAAAQNIYLDDCLGATNIIGHEFMAPTNLIYTDGVRMLNSTGVTISGCIFSMLNKGVSATGCGYSLITGNVFRGGNPSSFLKMIEIIGGARMMVNGNSFDGATEGVTIDATSDGCGIVGNTANVSTVGTRYTNLGTSPIGGANGSSGLNSGY
Physico‐chemical
properties
protein length:722 AA
molecular weight: 75949,19450 Da
isoelectric point:4,38862
aromaticity:0,09418
hydropathy:0,11191

Domains

Domains [InterPro]
DC_2164
STR
1–721
DC_2164
IPR012334
STR
169–305
IPR012334 IPR012334
IPR011050
STR
204–280
IPR011050 IPR011050 IPR011050
CAB4152108.1
1 722
Architecture
STR
STR 1-721 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
CAB4152108.1
1 722
Domain Start End Length (AA) Confidence
N-terminal 1 224 224 0,9952
Central domain 225 711 488 0,9280
C-terminal 712 722 10 0,5525
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-224
Central
225-711
C-terminal
712-722

Taxonomy

  Name Taxonomy ID Lineage
Phage uncultured Caudovirales phage
[NCBI] 		2100421 Uroviricota > Caudoviricetes > Peduoviridae > Maltschvirus maltsch >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CAB4152108.1 [NCBI]
Genbank nucleotide accession
LR796556 [NCBI]
CDS location
range 27352 -> 29520
strand -
CDS
ATGGCAGTTAATCTTTCCCCTATCGCTGGCGCAGGATGGCAATTTTTTGATAATGATGGCAGACCTTTATCTGGTGGCCTTCTTTATACTTACGCTGCTGGAACTTCTACACCTTTAGCTACATATACAACTGCCAACGGCAATATTGCTAATAGCAATCCTATTGTTATGGATGCTGCTGGTAGGCCACCACAAGAAATTTGGCTTACAGACACTTTTGCTTATAAATTTGTTTTAAAAGATGCTAATAGCGTTTTAATTGCTACTTGGGATAACATTACTGGAATTAATAGCAATTTCCAAGCATTTGCGCTTCAAGATGAAACTCAAACTGCAACACAAGGTCAAACAGTATTTACCTTGACTGGATTTGTATATCAACCTAGCACTAATAGCATTTCAGTTTTTGTAAACGGAAGCAAACAAATTTCTGGTACAAATTATGCAGAAACCTCTCCATCTGTTGTTACTTTTGCTGATGGTTTAAACGTAGGGGATATAGTTGAATTTACAACAGCCGTTCCAGTATCCACAAATCCTATTGATGCATCACAAGTAACCTATCTTCCTGGTGGAACTGATGCAGTAGCCACTAACGTTCAAGATAAGTTACGCCAAACAGTTTCTATTAAAGACTTTGGTGCTGTTTGTGATGGCACTACAAACGATACAGTAGCCGTTCAAAATGCAATTAGCTCAATTGGCTCAGGTGATGTAAGTTTAATTATTCCAGGGCCAACAAAGATTAACGCTAATTTAACTTTTAGCGGAAATACTCAGCTTGATTTCAGCCAAGGCGGTATGTTTATTGGTACTGCTGGGACTGAAGTAATTATTGTTACAAAGCTAAACGCCAATATTCAGCAAATTTTTTCAAATTGCAAGCCTATTTCTACAACAGGAATAACTGTATATCCTGAATGGTTTGGTGCTGTAAAAGATGGCACAACTGATGATCAGCCAGCATTTGCTTTGGCAATTGAATACTTAAAGAATGTTGGTGGAATTATTCAGTTGCAATCAGGTCATTATGCAATTGATAACCCAATTGAAGTTCTTTATAACCATATAACAATTCAAGGAGCAGGAAACAATGTTTCTTGGATTGATGTTACCTCTCCATCCGTTAATGGCATTGAAATAGTAGGCGTTTCAGGAACTCCAATTAGAAATGTAATGTTAAGAGATTTCAGCATTATTTCTGATACTTTTGGTTCTTCAAACGTTGGTATTACCATGTTCTACACAGCATTTGTGATTGTAGAACGTATGCAAATACATGATTTTATTATTGGCGTGTATATGAAGGGTGCTGGTAATACTCAGCTAGATACTATTGGTGCTACTTATACAGGCACAAACAATGGCTTTGTAGGATTTAATATTTATGGTGGCGTATCTGCTTCTGATGGAAATCCATCAAGCAATTTCCGTAGATGCTATACATCAGGCGTAACAGGAAAAACAGGGCAAATTGGATTCCGTATTTATGGCGTTTATATGTCTGATCTACAGTTTGAATTATGCGAAACAGCATTAACAAACTATGGATATGTTATTGATTACACTTCTGCTCCAAATTACAACGTAGATATTATTATTCGCAATCCAATTGTTGATCGCTATTTTGCTCAAGGTATTTTAGTAAACGCATTGCCAGCAAACGGAATGTTGCAAATTATTGGCGGTTACACCAATCCTGATACTTTAGGTGCTGCTGCTCAAAATATTTATCTGGATGATTGTTTGGGTGCTACCAACATTATTGGTCATGAGTTCATGGCCCCCACCAATCTTATTTATACAGATGGCGTTCGTATGTTGAACTCTACTGGAGTAACAATTTCTGGATGCATATTCTCAATGCTTAATAAAGGAGTTTCTGCTACTGGTTGCGGTTACAGTTTGATTACAGGAAATGTATTTAGAGGTGGAAATCCTTCTTCATTCTTAAAAATGATAGAAATTATTGGTGGCGCAAGAATGATGGTAAATGGCAATTCTTTTGATGGTGCTACTGAAGGCGTTACTATTGATGCAACTTCAGATGGATGCGGAATCGTTGGAAACACAGCAAACGTATCAACAGTTGGAACTAGATACACTAATTTGGGAACAAGCCCTATTGGTGGAGCAAATGGTTCAAGTGGTTTAAATAGCGGATACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f5163b07b4d83d49d5dba25bc9836d64e86a105d74902e44a8ef09d3f695764a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8600
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50