Protein

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Genbank accession
URC22108.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
TSP
Evidence RBPdetect2
Probability 0,67
Protein sequence
MGSLVDVSDFDKVDVVPIDNLPVAGGVNTGDYLVVNKGQGIGSVTTKATLGAIFMGSVEESKSAAQEAARSALEAKKSAEDSAGLQKPYKDVTEAQKAIDAGELKDGDVFSVVGSSPNNSYEFFFNEGGTAKPILDTNGTPKVFPNFNWYLEQLKMVDFNLGTLLPNHGYNTAAGDNAFEIGSMIGQLALYLDQAGKLVLPSGNFNLGGGKFMALPEDSEYALAFSDDEGRVTVGIGKDGWVEVLGMRLYKGPDSGDCLVVSDDDGYVSAKISNTGQVTVYDGNGGTGNNPGDGFLEFVERLHIFIYGQSLSNGAIGTPVLGTPVSDALMYNTGVRSYNKSPTSLTPLHETQEGSDGETIASGLAHNFSRNSGGMYGRKLILNAGGVGGARIEEISKGTASYTQLVVQMRQNAERMKQEGREYSPDFNIYMQGEANMAVGTSKAEYMALQTKLYDDLNADTRSIRVSGLELVQLTYQTSSHGFYVGTPENPSEVITQAQLELALTHPKIDMWGPTYMGLPGNLIKFQGNVHHSNHGYRIQGCYAEKALRHRIMTRSAENPEGTKYLPLHARSAKKINDHVVIIDMHVPHPPLVFDSSLVKELADGMHGVELHDATGRLPVTDVEIVGGTKLRVTTSSTLGDGVFAAFAWTPENRGEIDPVRNRYADWFFGRETGVRTTIRDSDRTTTDLTGEDGNPYPLHNYCVIQKIEVTQ
Physico‐chemical
properties
protein length:712 AA
molecular weight: 76885,01550 Da
isoelectric point:5,04448
aromaticity:0,08146
hydropathy:-0,33441

Domains

Domains [InterPro]
DC_0547
STR
36–699
DC_0547
IPR036514
STR
304–564
IPR036514
SSF52266
STR
305–548
SSF52266
URC22108.1
1 712
Architecture
STR
STR 36-699 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
URC22108.1
1 712
Domain Start End Length (AA) Confidence
N-terminal 1 599 599 0,6350
Central domain 600 701 103 0,6406
C-terminal 702 712 10 0,5965
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-599
Central
600-701
C-terminal
702-712

Taxonomy

  Name Taxonomy ID Lineage
Phage Serratia phage vB_SmaM-ChuuTotoro
[NCBI] 		2943832 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Serratia marcescens
[NCBI] 		615 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
URC22108.1 [NCBI]
Genbank nucleotide accession
ON287369.1 [NCBI]
CDS location
range 3031 -> 5169
strand -
CDS
ATGGGAAGCTTGGTTGATGTCTCAGATTTTGACAAGGTAGATGTAGTACCTATCGATAACCTACCCGTTGCAGGAGGGGTTAATACCGGGGATTATTTGGTAGTAAACAAGGGCCAAGGCATCGGATCAGTAACAACCAAGGCAACTCTAGGTGCCATCTTTATGGGGTCGGTAGAGGAATCCAAGAGTGCAGCACAAGAGGCCGCAAGATCTGCACTGGAGGCAAAGAAGAGTGCAGAGGATTCCGCAGGGCTGCAAAAACCGTACAAGGATGTCACAGAAGCACAAAAGGCCATTGATGCCGGAGAACTTAAAGACGGAGATGTTTTCAGTGTCGTAGGCAGCAGTCCAAACAACTCGTATGAGTTTTTCTTCAACGAGGGCGGGACTGCAAAACCAATTCTCGACACCAATGGTACCCCTAAAGTTTTCCCTAACTTCAACTGGTACCTAGAGCAGTTGAAGATGGTCGATTTCAATCTTGGAACCCTATTGCCAAATCACGGATACAACACAGCGGCAGGTGACAACGCATTTGAGATAGGCAGTATGATCGGCCAATTGGCCTTGTACTTGGACCAAGCGGGAAAGCTAGTCCTTCCCTCTGGGAACTTCAACCTTGGTGGTGGTAAATTCATGGCGTTGCCTGAAGATTCTGAATACGCCCTCGCATTCTCTGATGATGAGGGGAGAGTTACGGTAGGTATAGGCAAAGACGGATGGGTAGAAGTCTTGGGAATGAGGCTTTACAAAGGCCCAGATAGTGGTGACTGCCTTGTAGTCTCGGATGATGACGGATATGTGTCTGCCAAGATATCCAACACGGGGCAGGTAACCGTCTATGATGGAAACGGCGGGACCGGAAACAACCCCGGCGATGGATTTTTGGAGTTCGTGGAGAGACTGCACATTTTCATATACGGTCAGTCTTTGTCTAACGGGGCTATCGGAACCCCGGTGCTTGGAACTCCAGTAAGCGACGCCTTGATGTACAACACGGGGGTGAGAAGCTACAATAAATCTCCAACATCCTTGACCCCGCTGCACGAAACTCAAGAGGGTTCCGATGGGGAGACGATAGCCTCTGGTCTGGCTCATAACTTCTCCCGAAACTCTGGGGGTATGTACGGCAGGAAATTGATCTTGAATGCGGGCGGTGTTGGTGGTGCTCGAATCGAGGAAATCAGCAAAGGAACCGCATCTTACACCCAACTGGTGGTGCAGATGAGACAGAATGCCGAAAGGATGAAGCAAGAGGGTCGTGAATACAGCCCGGATTTCAACATATACATGCAGGGGGAAGCCAACATGGCTGTTGGCACGTCAAAGGCAGAGTATATGGCGCTCCAGACTAAACTCTACGACGACCTTAATGCAGATACGAGGTCTATCCGGGTGTCAGGTTTGGAGTTGGTGCAGTTGACCTACCAAACAAGTTCCCACGGCTTCTATGTTGGAACGCCAGAAAATCCATCCGAGGTGATAACGCAGGCCCAGCTTGAGTTGGCTCTCACCCACCCAAAAATAGACATGTGGGGACCTACCTACATGGGGTTGCCGGGGAACCTGATTAAGTTTCAGGGTAACGTCCACCACAGTAACCACGGATACAGGATACAGGGGTGCTATGCTGAAAAAGCCTTGAGGCACAGAATCATGACAAGGTCGGCGGAGAACCCAGAAGGTACAAAATACCTTCCGCTCCACGCAAGGTCCGCTAAGAAGATCAATGATCATGTGGTCATTATTGACATGCATGTCCCTCATCCACCTTTGGTCTTCGATAGCAGCCTAGTTAAAGAGTTGGCTGACGGTATGCATGGTGTTGAGCTTCATGATGCCACAGGGAGACTGCCGGTAACAGATGTTGAAATCGTCGGAGGTACCAAGCTAAGGGTAACAACATCATCCACCCTCGGCGATGGGGTTTTCGCGGCATTTGCATGGACTCCTGAAAACAGGGGTGAAATAGATCCAGTTAGGAACAGGTACGCTGATTGGTTCTTCGGAAGGGAAACAGGAGTAAGAACAACAATCAGAGACTCAGACCGTACAACCACAGATCTCACTGGGGAAGATGGAAATCCATACCCACTTCACAATTACTGCGTAATCCAAAAAATAGAGGTAACACAATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
28eed7f9845826d92a17c7cca0296f10f27cb0dddbf9dcd1de9a916922f52709
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7272
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50