Protein

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Genbank accession
WLW38777.1 [GenBank]
Protein name
minor structural protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MDSYLNGRKVDVLNPLDLIGVGRHKLEIQVDKKNYWNMFKEQIIIPTPPNNGVNNLFRGGEVLPSEVYNDNWYKTFAWFAFGGQSTVEHKSDLYPQMNYFKFANATGTVDMPANQFEKEVELKPNTRYTWQFNARKIKGDMITSFGSSSSILVDNTKDVTIDGETGLRLGTDLYYNWSNKAVTGGWELHYISFTTASTFPTSKVFRFIMNAGSEWHVKNIQITEGEGPKPFQLSEADRYKYTQYQMDKGHREIYPNFGFYYSEEFDFCCAYKVNIHSGFETVDFNPVEQSYTIRCEVENFAQILNPVKEYYIKVPSSCTFDNSILMNPTTERGGNYLLECKAKGLHLQVFEQPDGDYSRSQNRKVYSNMYDNLSNKLWNVYGGFVYTGELQTYKVEN
Physico‐chemical
properties
protein length:397 AA
molecular weight: 45935,89280 Da
isoelectric point:5,62850
aromaticity:0,15113
hydropathy:-0,59471

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WLW38777.1
1 397
Domain Start End Length (AA) Confidence
N-terminal 1 26 26 0,9457
Central domain 27 225 200 0,0652
C-terminal 226 397 171 0,8768
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-26
Central
27-225
C-terminal
226-397

Taxonomy

  Name Taxonomy ID Lineage
Phage Lactococcus phage STA135
[NCBI] 		3065250 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Lactococcus lactis
[NCBI] 		1358 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WLW38777.1 [NCBI]
Genbank nucleotide accession
OQ985164 [NCBI]
CDS location
range 19916 -> 21109
strand +
CDS
ATGGATAGTTATTTAAACGGAAGAAAAGTAGATGTATTAAACCCTTTAGATTTAATCGGAGTAGGTCGCCATAAGTTAGAAATACAAGTAGACAAGAAAAATTATTGGAACATGTTCAAGGAACAAATAATTATTCCAACACCGCCAAATAACGGTGTAAATAACTTGTTTAGGGGTGGAGAGGTTTTGCCTAGTGAGGTGTATAACGATAACTGGTATAAAACTTTTGCTTGGTTTGCTTTTGGTGGTCAAAGTACCGTAGAACATAAAAGTGATTTATATCCTCAAATGAATTATTTTAAGTTCGCAAATGCCACAGGAACGGTTGATATGCCCGCAAATCAGTTTGAAAAAGAAGTAGAACTAAAACCAAACACACGCTATACATGGCAATTTAACGCTAGAAAAATAAAAGGCGATATGATTACTTCTTTTGGTTCTAGTAGTAGTATTTTAGTTGATAACACTAAAGATGTAACAATTGACGGAGAAACAGGCTTAAGACTTGGTACAGACTTATATTATAATTGGAGTAATAAAGCAGTAACAGGCGGTTGGGAATTGCATTATATTTCTTTTACTACTGCTTCAACGTTTCCAACATCTAAAGTATTTCGCTTTATAATGAATGCAGGTAGTGAATGGCATGTAAAAAATATCCAAATCACAGAGGGCGAAGGACCTAAACCGTTTCAATTGTCAGAAGCAGACAGATACAAGTATACACAGTACCAAATGGATAAAGGACACAGAGAAATTTATCCAAACTTTGGTTTCTATTATAGTGAAGAATTTGACTTCTGTTGTGCTTATAAAGTCAATATCCATTCAGGTTTTGAAACTGTTGATTTTAACCCTGTTGAACAGAGTTATACAATTAGATGTGAGGTTGAAAACTTTGCTCAAATATTAAACCCAGTTAAAGAGTATTATATCAAAGTACCAAGCAGTTGCACTTTTGATAATAGCATACTAATGAACCCTACAACAGAAAGAGGAGGTAATTACTTACTAGAATGTAAAGCTAAAGGACTGCACTTACAAGTGTTTGAACAACCTGACGGAGATTATAGCAGAAGTCAGAACAGAAAAGTGTACTCAAACATGTATGATAATTTAAGTAATAAATTATGGAACGTTTATGGTGGCTTTGTGTATACTGGAGAACTACAAACGTACAAAGTAGAAAACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ee6139d0528c415d0e536088a8db587442f63b316df98113e2eeb28df547d67a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4881
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and sequencing of ten Lactococcus lactis, c2-related bacteriophages from dairy industry plants in Russia Pechenov,P., Stanovov,D., Efimov,A., Belalov,I., Kulikov,E. and Letarov,A. 2023-11-28 — GenBank