Protein

View in Explore
Genbank accession
YP_002224457.1 [GenBank]
Protein name
virion structural protein
RBP type
TF
Evidence RBPdetect2
Probability 0,72
Protein sequence
MQTRALRVNFERSVTAGKPDIMEVVVVPLTEPNAPNNNATLVGGPWPEEVLLTNEKNTVVFNLVPTDHPDLTQRVTYRIAWRKGYMGRQTSADFVMPDFDVDYDDLKDLGNIIGGETYVQWTDRGRAGGVAALNSSGQVVDADGNVVGSDTDGATKGELDAEIVNRQQADQSLRNFLLGFVQDQVAQIYTTTANRLMQEVGQLQNADTTEKAQRIAAVAQTNHTLTLLQQATNEQIAYLNDLLDTYNGQFASKADLVGGKIPSSQLPDVALGRAVPVESEAAMLSLTATQVQPGDFAVRPDGVWFLNALPPSSIDNWLQFTIAASVFSVNGQDGAVVLSAADVGARDADTPIPMSDITGLTSALSAKADNSALTSLGGRVTAIESDTSYVKKGPGGLILRADLPTDVVFVNESNLITKKDGTVLNVGSGGELDIDDVGGLTEALDSKLDADDPSVTNARIPTAHAASHASAGDDPLAPEDIGAAPEVHTHDQDEIDGLTALLANRTSRIASLEGRVEDLELGGGSGGPGAGASGKTVWWHNTEPISPLDTATDEIILRSPFGFDGSVYYYDPAGVDPGEAVWPYLTPNGHLKFVARNESAPEDPAYATAQSVSDLSDLVATKADSGDLTALSLAVDGKASTSALSSLAATVATKADTSALNATNTAVSSKADQSALDTLSGIVGGKADASALSSLASTVADKADKSDVTALTSRVGAVETGKADLVSGTVPTAQIPSLAMSKITDLNPTLAGKADLSGGKLVSSQVPDIATSKVTGLDTALSQKADLIAGKIPTSQIPSVALTTTYTVANRGAMLALTTGQVQRGDIAVITATDDKGSYILNADDPSVFGNWVPLVAPDDTVQTVNGKTGTVVLSAADVGARSSAASIPMSDITGLVTALNGKVDTSTYTTGLAGKASPADVQNLLSESTVFKQRADLVATSAVASTSGQQSIDGVLTPVGSIVLLTAQSSSVANGLWQVASGSWSRVTDMAAGSYFLKGTAVVVTSGANNANSIWQQTNNSGVVGTNANNWSKILTAGAVPNFTASLGVSRVGNDFRAAVVSGGGVQVVSGGLQLDPNVAARKYAADVPAGSTVATITHGLNTLDVHASFRDKASGDAVLVGWRPTGVNTISVEFESAPASGQYRVTVVG
Physico‐chemical
properties
protein length:1151 AA
molecular weight: 118462,07040 Da
isoelectric point:4,46711
aromaticity:0,04778
hydropathy:-0,04831

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Mycobacterium phage Spud
[NCBI] 		546808 Uroviricota > Caudoviricetes > Ceeclamvirinae > Bixzunavirus Bxz1 >
Host Mycobacterium sp.
[NCBI] 		1785 cellular organisms > Bacteria > Bacillati > Actinomycetota > Actinomycetes > Mycobacteriales
Host Mycobacterium smegmatis str. MC2 155
[NCBI] 		246196 Bacteria > Actinobacteria > Actinobacteria > Corynebacteriales > Mycobacteriaceae > Mycobacterium

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_002224457.1 [NCBI]
Genbank nucleotide accession
NC_011270 [NCBI]
CDS location
range 135556 -> 139011
strand +
CDS
GTGCAAACGAGGGCTCTTCGGGTCAACTTTGAGCGGTCGGTCACTGCCGGGAAACCCGACATCATGGAGGTTGTGGTCGTTCCGCTGACCGAACCCAACGCTCCCAACAACAACGCGACACTGGTCGGCGGGCCGTGGCCGGAAGAGGTCCTGCTCACCAACGAAAAGAACACGGTCGTGTTCAACCTGGTGCCCACCGACCATCCAGACCTCACCCAGCGGGTTACCTACCGAATCGCATGGCGCAAGGGCTACATGGGTCGTCAGACCTCCGCTGACTTTGTCATGCCCGACTTCGACGTCGACTATGACGACCTCAAGGATCTGGGCAACATCATCGGCGGGGAGACCTACGTCCAGTGGACCGACCGTGGTCGTGCTGGCGGCGTGGCCGCGCTCAACAGCTCCGGTCAGGTGGTCGACGCCGACGGCAATGTCGTGGGCAGCGATACCGACGGGGCCACCAAGGGCGAGCTTGACGCCGAGATCGTCAACCGACAGCAGGCCGACCAGAGCCTGCGCAACTTCCTGCTGGGATTCGTCCAGGACCAGGTCGCACAGATCTACACCACCACGGCCAACCGGCTCATGCAGGAGGTCGGCCAGCTCCAGAACGCCGACACCACCGAGAAGGCGCAGCGCATCGCGGCGGTCGCGCAGACCAACCACACGCTGACCCTGCTCCAGCAGGCCACCAACGAGCAGATCGCCTATCTCAACGACCTGCTGGACACCTACAACGGCCAGTTCGCCAGCAAGGCCGACCTGGTGGGCGGCAAGATCCCCTCCAGCCAACTGCCCGACGTCGCGCTCGGGCGCGCGGTCCCGGTCGAGTCCGAGGCCGCGATGCTCTCGCTGACCGCCACTCAGGTGCAGCCGGGCGACTTCGCCGTGCGTCCCGACGGGGTGTGGTTCCTCAACGCGCTGCCGCCGAGCAGCATCGACAACTGGCTGCAGTTCACCATTGCGGCGAGCGTGTTCAGCGTCAACGGCCAGGACGGCGCCGTGGTGCTGTCCGCCGCCGACGTGGGCGCCCGTGACGCCGACACCCCGATCCCGATGTCCGACATCACCGGGCTCACCTCCGCGCTGTCCGCCAAGGCCGACAACTCTGCACTCACCTCGCTCGGCGGTCGGGTGACGGCCATCGAGAGCGACACCTCCTACGTCAAGAAGGGCCCGGGCGGGCTCATCCTGCGCGCCGATCTGCCCACTGACGTGGTGTTCGTCAACGAGTCGAACCTGATCACCAAGAAGGACGGCACCGTCCTCAACGTGGGCTCCGGCGGCGAGCTGGACATCGACGATGTCGGTGGCCTGACCGAGGCCCTGGACAGCAAGCTCGACGCCGACGATCCCTCGGTGACCAATGCCCGCATCCCTACCGCGCACGCCGCGAGTCATGCGTCCGCCGGTGATGATCCGCTGGCGCCGGAGGACATCGGTGCCGCCCCGGAGGTCCACACCCACGACCAGGACGAGATCGACGGTCTGACCGCGCTGCTGGCCAACCGGACCTCGCGCATCGCCAGCCTGGAGGGCCGCGTCGAGGACCTGGAGCTCGGCGGCGGCAGCGGAGGCCCGGGTGCCGGAGCGTCCGGCAAGACGGTCTGGTGGCACAACACCGAGCCGATCAGCCCGCTGGACACCGCCACCGACGAGATCATCCTGCGCAGCCCGTTCGGCTTCGACGGTAGCGTCTACTACTACGACCCGGCGGGCGTGGACCCCGGCGAGGCCGTCTGGCCCTACCTGACCCCCAACGGCCACCTCAAGTTCGTCGCGCGCAACGAGAGCGCCCCGGAAGATCCCGCGTACGCCACAGCGCAGTCCGTGAGCGACCTGTCCGACCTCGTCGCCACCAAGGCCGACAGCGGTGACCTGACCGCGCTCAGCCTGGCGGTCGACGGCAAGGCCTCGACCTCGGCACTGTCTTCGCTGGCCGCGACGGTGGCCACCAAGGCCGACACCTCGGCGCTCAACGCCACCAACACCGCCGTGAGCAGCAAGGCCGATCAGTCCGCGCTGGACACCCTGAGCGGCATCGTCGGCGGCAAGGCCGACGCATCGGCGCTGAGCTCGCTGGCGTCCACCGTCGCTGACAAGGCCGACAAGTCCGACGTCACCGCGCTCACCTCGCGCGTCGGCGCCGTGGAGACCGGCAAGGCCGATCTGGTCAGCGGCACCGTGCCGACCGCCCAGATCCCGTCGCTGGCCATGTCCAAGATCACCGACCTGAACCCCACGCTTGCGGGCAAGGCCGACCTGTCCGGCGGCAAGCTGGTCTCCTCGCAGGTGCCCGACATCGCCACCAGCAAGGTCACCGGTCTGGACACGGCGCTGAGCCAGAAGGCCGACCTGATCGCGGGCAAGATTCCGACCAGCCAGATCCCCTCGGTGGCCCTGACCACGACATACACCGTGGCCAACCGGGGCGCCATGCTCGCGCTGACCACCGGACAGGTGCAGCGCGGCGACATCGCGGTCATCACTGCCACCGACGACAAGGGCTCCTACATCCTCAACGCCGACGACCCGAGCGTCTTCGGCAACTGGGTGCCGCTGGTCGCGCCGGACGACACCGTGCAAACCGTCAACGGCAAGACCGGCACCGTGGTCCTCTCGGCAGCCGACGTCGGTGCCCGGTCCTCGGCGGCGTCGATCCCGATGTCCGACATCACCGGCCTGGTCACCGCGCTCAACGGCAAGGTGGACACCAGCACCTACACCACCGGCCTGGCGGGCAAGGCCAGCCCGGCAGACGTGCAGAACCTGCTCTCGGAGTCCACGGTCTTCAAGCAGCGTGCCGACCTGGTGGCCACCTCGGCGGTCGCATCCACCTCGGGCCAGCAATCCATCGACGGCGTGCTCACCCCGGTCGGCTCGATCGTCCTGCTGACCGCTCAGTCGTCCTCGGTGGCCAACGGCCTGTGGCAGGTCGCCTCGGGCTCGTGGTCGCGCGTGACCGACATGGCAGCGGGCAGCTACTTCCTCAAGGGCACCGCCGTCGTGGTGACCAGCGGCGCCAACAACGCCAACAGCATCTGGCAGCAGACCAACAACTCCGGTGTGGTGGGCACCAACGCCAACAACTGGTCGAAGATCCTCACCGCCGGTGCGGTGCCCAACTTCACCGCCAGCCTGGGCGTGAGCCGTGTGGGTAACGACTTCCGCGCCGCTGTGGTCTCCGGTGGCGGTGTGCAGGTGGTCTCCGGCGGTCTGCAGCTCGACCCCAACGTGGCCGCGCGCAAGTACGCTGCCGACGTGCCCGCCGGATCGACGGTCGCGACCATCACCCACGGCCTCAACACCCTCGACGTGCATGCCAGCTTCCGTGACAAGGCCTCGGGTGACGCGGTCCTGGTGGGCTGGCGCCCGACCGGCGTCAACACCATCTCGGTGGAGTTCGAGTCCGCACCGGCCTCGGGTCAGTACAGGGTTACTGTTGTTGGGTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
484ff10367f6fd45d292e3e6871c6cb3ca39cd0ca8165fce281d03f8ae5ab2a9
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3317
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50