Protein

View in Explore
Genbank accession
BCK59801.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,63
Protein sequence
MALILTSITVNSTIADLTKQVNSIGSVLTEDRNIFEVTKDLQLDVSKAQKVKLTTDRGLAKAIYYTNYLRDIKIVGLYYIGARKLATMYEKADMENIDVLLQVLPLDTEDGVIRILYTLSTADSKSKVMHRSVTNYQTSQWQVVQSLPNNKYSSHIGGSPFDINTQGTYYVSNMSEMDSSVYEGFLQVSIDSNDKSVLRLTDSNTGKEYLNVKKSYDNWGVPTTDLDSQKISKFLVSNVNGDAENNNLSLSVYTSRLITAQAPIAKHIEETSKTVFTFYIQGGVSGSPSTVSIRGIFIYHSNNYTGLYGVYTAIGTDGITINGSVNGNTWNTRETLPGFKELENGAHNLKDTNKKETMSDSISHPEYVEVYTRYRALQNTKGTDKTGTLCHKFYIDGDGIYTCSGAYVSGDSNIGVEYYRVTLSITGDTWASQDSAINNKKDQYVTRVVGISLP
Physico‐chemical
properties
protein length:454 AA
molecular weight: 50312,67350 Da
isoelectric point:5,86660
aromaticity:0,09251
hydropathy:-0,35683

Domains

Domains [InterPro]
DC_1773
STR
8–246
DC_1773 IPR057110
DC_0448
STR
194–453
DC_0448
BCK59801.1
1 454
Architecture
STR
STR 8-454
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
BCK59801.1
1 454
Domain Start End Length (AA) Confidence
N-terminal 1 322 322 0,6785
Central domain 323 443 122 0,0143
C-terminal 444 454 10 0,9902
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-322
Central
323-443
C-terminal
444-454

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage vB_SauH_DELF3
[NCBI] 		2766478 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Staphylococcus aureus
[NCBI] 		1280 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
BCK59801.1 [NCBI]
Genbank nucleotide accession
LC576631.1 [NCBI]
CDS location
range 82568 -> 83932
strand +
CDS
ATGGCACTAATACTTACATCTATTACGGTAAACAGTACAATAGCAGACCTAACAAAACAAGTTAATTCGATAGGTAGTGTATTAACTGAGGATAGAAATATCTTTGAAGTAACCAAAGACTTACAATTAGACGTAAGTAAAGCACAGAAAGTTAAGTTAACAACGGATAGAGGATTAGCTAAAGCCATATATTATACCAATTACTTAAGAGACATTAAAATAGTAGGTTTATATTACATTGGAGCACGGAAATTGGCTACTATGTATGAGAAAGCCGATATGGAAAATATAGATGTATTACTTCAAGTATTACCATTAGATACTGAGGACGGAGTAATACGAATATTGTATACATTGTCGACGGCGGACAGTAAATCAAAAGTGATGCACCGATCCGTTACTAACTACCAAACATCACAATGGCAAGTAGTACAAAGTTTACCTAATAATAAATACTCATCACATATAGGTGGAAGTCCTTTTGATATTAATACACAAGGTACATATTACGTGTCTAATATGTCGGAAATGGATAGCAGTGTTTATGAAGGATTCTTACAAGTTTCCATAGACAGTAATGATAAGAGTGTGTTAAGATTAACGGATAGTAACACGGGAAAAGAATATCTTAATGTTAAGAAATCGTATGACAATTGGGGTGTGCCGACAACTGATTTAGACTCTCAAAAGATAAGCAAGTTTCTTGTATCTAATGTAAATGGGGATGCGGAAAACAATAACCTCTCTTTATCAGTATATACATCTAGACTTATAACAGCCCAAGCTCCTATAGCTAAACATATTGAAGAAACAAGTAAAACTGTTTTTACTTTCTATATACAAGGTGGTGTTTCAGGCTCTCCGTCTACGGTTAGTATCAGAGGTATATTTATATATCACTCAAACAACTATACGGGTTTATATGGTGTATATACCGCAATAGGTACTGACGGTATAACTATTAATGGTTCGGTAAATGGTAATACATGGAACACAAGGGAAACACTACCAGGATTTAAAGAGCTGGAAAATGGTGCACATAACTTAAAAGATACAAATAAAAAAGAAACTATGTCTGATTCTATATCTCACCCGGAGTATGTAGAAGTATACACAAGATATAGAGCTCTACAAAATACAAAAGGTACTGATAAAACAGGTACACTATGTCATAAGTTCTATATAGATGGAGACGGTATTTACACATGTTCAGGAGCTTATGTATCAGGAGACTCTAATATTGGAGTAGAGTACTATCGAGTAACTTTATCTATTACTGGTGATACTTGGGCAAGTCAAGATAGTGCAATAAATAATAAGAAAGACCAATATGTTACACGTGTTGTAGGTATCTCTTTACCCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
680709d005692e26d4cb0aa57d56ec4363bef86c2fbce6b7e0c63b4e41cdb9d3
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6475
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
genome analysis of Staphylococcus aureus vB_SauH_DELF3 lytic bacteriophage Soleimani-Delfan,A., Bouzari,M. and Wang,R. 2021-10-02 — GenBank