Protein

View in Explore
Genbank accession
AIZ01467.1 [GenBank]
Protein name
tail fiber
RBP type
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MTIQNKEPFVYATGNGVTATIPFTFPANSASDVYGAINGIDQSVTVVLSPDQINSPGGTLTFNGGAAPLGSSVLVYRNTKMEQTLSYPTKGSFPSKSHESAMDKLVMIAQDLNFLLASRCLRAPNGEKFIKELPPIQERSGKFLGFDPAGNPYAAAPIRGEDGTNGLPPYISDGTDGFNAGNWVAFSIQDNSYKDTGVRALGVDGLPPYISNGTDGFTSGNWIVDDGSTNYVDTGVRAKGDKGDKGDDALSPYVSDGTDGFTAGNWVADNGSGAYADTGIGAKGDKGDTGDDGLPPYISDGSDTFVAGNWIADNGSGVYVDTGIPARPNLQYATETTIGGMRWSLVGTTLNLYFTDV
Physico‐chemical
properties
protein length:357 AA
molecular weight: 37306,51130 Da
isoelectric point:4,28619
aromaticity:0,09804
hydropathy:-0,32017

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage H1
[NCBI] 		1558464 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio cholerae
[NCBI] 		666 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AIZ01467.1 [NCBI]
Genbank nucleotide accession
KM612261 [NCBI]
CDS location
range 19367 -> 20440
strand +
CDS
ATGACTATCCAGAACAAAGAACCCTTTGTATATGCCACTGGTAACGGAGTGACGGCCACTATTCCCTTCACATTTCCGGCCAACTCGGCCTCGGACGTGTATGGTGCAATCAACGGAATAGACCAGTCAGTAACTGTAGTGCTGAGTCCCGACCAGATAAATAGTCCAGGCGGAACATTGACATTTAATGGTGGCGCGGCTCCCTTGGGTTCAAGTGTCTTGGTCTATCGCAACACAAAGATGGAGCAGACTTTGTCGTACCCGACTAAGGGCAGCTTTCCGTCCAAGTCACATGAGTCTGCTATGGATAAACTGGTGATGATTGCGCAGGACTTGAATTTCCTTTTAGCGTCTCGTTGCTTGAGAGCGCCGAACGGAGAAAAATTCATCAAGGAATTGCCACCAATCCAAGAACGCTCCGGAAAATTTCTTGGCTTTGACCCTGCAGGCAATCCATATGCAGCAGCTCCGATTCGCGGCGAGGACGGCACAAATGGTCTTCCTCCTTACATCTCGGATGGTACTGATGGATTCAACGCCGGAAACTGGGTAGCATTCTCCATTCAAGACAACTCATACAAGGATACAGGCGTCCGCGCTCTTGGCGTTGATGGCTTACCTCCTTACATCTCGAATGGCACTGACGGATTTACGTCAGGAAACTGGATTGTCGACGACGGAAGCACTAACTATGTTGACACGGGAGTAAGGGCGAAGGGAGACAAAGGCGACAAAGGTGACGACGCTCTATCGCCTTATGTGTCTGATGGGACTGACGGATTCACCGCAGGAAACTGGGTCGCGGACAATGGCTCCGGTGCTTATGCGGACACAGGAATCGGGGCAAAAGGTGATAAGGGTGACACAGGCGACGATGGCCTACCGCCTTACATCTCGGATGGTAGTGATACCTTTGTTGCGGGCAACTGGATTGCAGACAACGGCTCCGGTGTGTATGTTGATACAGGTATTCCTGCTCGACCGAATTTGCAATACGCCACAGAAACCACAATCGGCGGTATGCGTTGGTCATTGGTTGGGACTACTTTAAACTTGTATTTTACGGACGTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
035bd047422379181ba1f085572d0b9a01981fde3cf079af4bf43d065e0e6e92
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7986
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequences of seven Vibrio cholerae phages isolated in China Bhandare,S.G., Warry,A., Emes,R.D., Su,J., Barrow,P.A. and Atterbury,R.J. — — GenBank