Protein

View in Explore

Genbank accession

YP_009806749.1 [GenBank]

Protein name

tail fiber protein

RBP type

Evidence GenBank

Probability 1,00

Evidence Phold

Probability 1,00

Protein sequence

MAKKGDFDDLDLDNMDWDDFGEPPRQKDTKRNPVLNTLNTVRKSALAAVWPKGKRDQVIMKGMPKPAADAYKGYQDVSAAAKDIAAHTKEEVVKTNRVIKQQVRQLTPTMRRYLPDSLTRKMERWSKSDDQQYNNYDPRQAQMDREMSGVMGGEGDYKDAVRDQADAREQAVEDRVRDSIREMKSDAMFGVVNAIAKDIHLQSSLQKGVMLNISRKQLELQYRILFALEDANKLNQTQFDRNTPALEAIVKNTALPDYAKEEFSEIHWANIKRKAADWMNPLKYADGFIDQIRNNTKKKISEGFGDARGMLEMLMGSAIEDDFDLDDSSSLSADKRRQNGTQKAVGWLSSQAAKRLLGPQIEKLQKHTREKLEMNPDFMKQAQRGKFMFGNLSSISNSAIAGEDMGAAGSIFRALHMLGIINPLQREQGMLDEREPGMLSRASKFDHRTWLSINEIIPAWLSEINKSIRRGYGEHADMEYDITSRGFVDRKVIGNRVRKSVANDDERKRLQGSIGSTVDYLDHNKSLNQRERQRLADFIEERASTGKAIDVQALSRDPQALQRFMGFEGADKIQQLMNSHPGQGVGGGYELSNELANRMAAIQSSISRRQGRIDAAAGLYGERALRDAGIFHYDDKNDVFHVDRDLNDPHTLFNDLAMGKTRSGRSLTREQEIQRKLQNGSALGDLLRRRGMGDGSKKEEERRRGAGFGGGMRGGLSALALSNVLYGDKPTTLPDLFEGMKSTLGSGGASSNDDLIRAIRENNQGELLSKILDHVRDMNEEGVFILNSLNMGGDDLHGPSPAPGGSGGGGGSGGGLFRRWGRLGRDTAAGGWRQAKRGFNGARARGGRLASWLRGRFSGGGAAGTSMFQRVLGAGSNALSGIRSFGKGLLGARDIYNAQGKVVLNGKRLAAGDYYQMGSGQGSQMTQLHALGDIRMGRDIIDAQGNVILSAADLAQGGELTFYNGSNWKKLFDVIGNKAGEAGRGILSLPGRLASKIKNPLRTVKDWFTQAPDIYVKGETNPRLFANRMREGEYRLKEGGRIIYKASEVTGAVVDAQGNDVITAEELANPNFKLVDRFGRAVKSPLGRIVGRVTGIGRFALNAAGRIPSMIRGGIDRIKGMAQNNPLTRWWNNRGSSSDSKWFSGNSFFGGLGGGSKKTNHILLRIYKLLNNRLSGEPEDESWADTMEAGVGGGNTFGRVKGGIGRAFRRGRVMSRRRWGRRFNNVRNRVSGWFGRGRAAASDLYGRGADTARDIANRYTGAEHDIGLRYLVEQRLAGRDDESAEFYRDRLHRRKGLNANRLRSDLNDTAEEATDAAGRVINTGKKKVQSVGQAMLEKLNRMVGLQEITWFDKMRSSTLDAGGSEGFVRGMMNKFTRRNKFGDSTEKKDYLNFFRRKQSHREGGEGHAGGSGGGQRGGVMGVLDKLTGVIGGIGGVLGTLGSALGFVGKWGLWKPGKLLARGGWALATRALPWAARAIAAPLISGAAALVTAIGWPAIAVGAAVAGIGYAAYKIATNVPAKYLDRMRLAQYGFRDYESWNSDDGAKARYLEDQLKGYISYNNDGAATLRGLSASDVEKLAAGFGVNKDEKSELVSFHAFMLQRFIPLYLRWMSSLRQLESDVALKDLGDVTKVSKEDMKTLFAKNKLSKDSQYLKAIEDPRKTNQGFFSKAWDTITFTSPDLLGADDVMDVQNEVEKSIKFRAEGSAAVRNHLAPPTADGTKVSGVAESVNRLATLDQERRDHTIKKEGWEDGNEQVTVQVDYNSVVQQKDVDALQSLRMKAYGLTTLNPAQVKSLLLMERLVYPSIDVKNNTYKGRWQEAIDALVPGGSTSEKADRLKYWFYNRFLPVFMTYVVGVYRYQPTANPLDLKLSGGYLYEVGLMTSRAYSMKNDIRQSVWDIAINPFGGDANTVASSVNAELESLHVLSKEADLAVRNLMRENEKKQGRAQWKQKELTKGLYGGDAMSDNGVSSYAPGSAEALRAAGLNGRSGYDGGGGGWNGSSEIAAAGGIGNYAAMTTGSTNISLGQMGDGNYKELAEKYPRASLNNVANVKAMIVDVAQRLGVPPGVALGMAYAESKFNYKAWNKDSGAGGLYQFIKSTWSGKGNAPGELQNYGNKFGIPNGATQLDPYANTLLGINFIRNNISKAQSDYGGQVPPGVAYLYHFLGAGDAAKFMKAYKANPNAPANSIRYSSSGVIGNNMSVFTSGGRIRSFAQVMQELNGRMGSQVANIATSNSDLAKQAMSGQTPTDPARAAGAPAANDADGAIQTAQRKDVALAQKGAQAANDAATQSASVTAPNPAGVSAANSPSDIAKDADNIQAAAEADGMSPADAAKVGAGYANQATAQAKPRKAANDMPVSAGDMVTVSRMDELIDIEGQSRDYLSKIWEYLQKGGTLNGAPPAAQAATAPGAASRKTQTTAPAPTLNLNRKAS

Physico‐chemical properties

protein length:	2434 AA
molecular weight:	264682,80740 Da
isoelectric point:	9,58421
aromaticity:	0,07395
hydropathy:	-0,54491

Domains

Domains [InterPro]

DC_0337
STR
1–2113

DC_0337 DC_1689

IPR023346
STR
2040–2153

IPR023346

G3DSA:1.10.530.10
RBD
2042–2228

G3DSA:1.10.530.10

IPR008258
ENZ
2059–2184

IPR008258

YP_009806749.1

1 2434

Architecture

STR

RBD

STR 1-2153 | RBD 2154-2228 | RBD 2243-2434

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
DC_0337	STR	DC_0337	1	2113	Novel HMM	DC_0337	Central	Low	Positional only	32 proteins / 32 hits
IPR023346	STR	IPR023346	2040	2153	Merged direct domain	Lysozyme-like domain superfamily	Central	Low	Positional only	29 proteins / 29 hits
G3DSA:1.10.530.10	RBD	G3DSA:1.10.530.10	2042	2228	Merged direct domain	G3DSA:1.10.530.10	C-terminal	Low	Positional only	95 proteins / 95 hits
IPR008258	ENZ	DC_0010	2059	2184	InterPro cluster	Transglycosylase SLT domain 1	C-terminal	High	Text match	100 proteins / 142 hits
DC_1689	RBD	DC_1689	2243	2434	Novel HMM	DC_1689	C-terminal	Low	Positional only	5 proteins / 5 hits

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Erwinia phage Wellington [NCBI]	2267653	Uroviricota > Caudoviricetes > Chimalliviridae > Wellingtonvirus wellington >
Host	No host information

Coding sequence (CDS)

Genbank protein accession

YP_009806749.1 [NCBI]

Genbank nucleotide accession

NC_048016.1 [NCBI]

CDS location

range 207122 -> 214426
strand -

CDS

ATGGCTAAAAAAGGCGATTTCGACGATCTTGATCTCGACAACATGGATTGGGATGACTTCGGTGAGCCACCGCGCCAGAAGGACACGAAACGCAATCCGGTGTTGAATACACTTAACACTGTGCGTAAATCGGCACTGGCGGCCGTGTGGCCAAAAGGTAAGCGTGATCAGGTGATCATGAAGGGTATGCCAAAGCCCGCGGCTGATGCTTATAAAGGCTATCAGGACGTGTCGGCAGCGGCAAAGGACATTGCTGCTCATACCAAAGAGGAGGTCGTCAAGACCAACCGGGTTATCAAGCAGCAGGTGCGTCAGCTTACCCCGACAATGCGCCGGTACCTGCCTGATAGCCTGACCCGTAAAATGGAACGTTGGTCAAAGTCCGACGACCAGCAGTACAACAATTACGACCCACGTCAAGCGCAGATGGATCGCGAGATGAGTGGTGTCATGGGTGGCGAGGGCGACTACAAAGACGCCGTTCGTGACCAAGCCGATGCCCGTGAGCAGGCCGTCGAAGACCGTGTCCGCGATTCGATTCGTGAGATGAAGTCTGATGCGATGTTTGGGGTGGTCAACGCGATCGCCAAAGACATCCATCTGCAGTCCTCGTTGCAAAAAGGGGTGATGCTCAACATCTCCCGTAAGCAGTTGGAATTGCAGTACCGTATTCTCTTTGCATTGGAAGATGCAAACAAACTCAACCAGACCCAGTTCGACCGTAACACCCCGGCACTGGAAGCGATTGTCAAGAACACGGCGCTGCCGGATTACGCCAAGGAAGAGTTCTCCGAGATTCACTGGGCGAACATCAAGCGTAAAGCCGCCGACTGGATGAACCCCCTGAAATACGCAGACGGGTTCATTGACCAGATTCGCAACAATACCAAGAAGAAAATCTCCGAAGGATTCGGCGATGCGCGTGGTATGCTCGAAATGCTCATGGGAAGCGCCATAGAGGACGATTTCGACCTCGATGATAGTTCTTCCTTATCTGCAGACAAACGTCGGCAGAATGGCACACAGAAGGCTGTAGGGTGGTTGTCTTCTCAGGCAGCTAAACGTCTGCTGGGTCCACAGATTGAAAAGCTGCAAAAGCACACCCGCGAAAAGCTCGAGATGAACCCCGACTTCATGAAACAAGCCCAGCGTGGTAAGTTCATGTTCGGTAACCTGTCCTCGATTTCTAACTCAGCGATTGCCGGGGAAGACATGGGTGCGGCAGGTAGCATCTTCCGTGCCTTGCACATGCTTGGGATTATCAACCCACTGCAGCGTGAGCAAGGGATGTTGGATGAGCGCGAACCGGGGATGTTGTCTCGGGCGTCTAAGTTCGACCACCGGACGTGGCTGTCGATTAACGAAATCATTCCTGCGTGGCTGAGTGAAATCAACAAATCGATTCGTCGGGGTTATGGCGAACACGCCGACATGGAATACGACATCACGAGCCGGGGCTTTGTTGACCGCAAGGTTATCGGTAACCGTGTGCGTAAGTCGGTTGCCAACGATGATGAGCGTAAACGTTTGCAGGGCAGCATCGGTTCCACGGTGGACTACCTTGACCACAACAAGAGCCTGAACCAACGTGAGCGTCAACGTCTGGCGGACTTTATCGAAGAGCGTGCCTCAACCGGTAAAGCCATTGACGTCCAAGCCCTGTCGCGTGACCCGCAAGCCCTTCAGCGGTTCATGGGGTTTGAAGGTGCGGATAAAATCCAGCAACTGATGAACTCACATCCCGGTCAAGGGGTGGGTGGCGGTTACGAGCTCTCTAATGAGTTGGCGAACCGCATGGCGGCGATTCAGTCGTCCATCAGTCGTCGTCAAGGGCGTATTGATGCGGCTGCGGGTCTCTACGGGGAACGTGCCCTGCGTGATGCCGGTATCTTCCACTACGACGACAAGAACGATGTCTTCCACGTTGACCGTGATTTGAATGACCCGCATACATTGTTCAATGACTTGGCCATGGGCAAAACCCGAAGCGGTCGGTCATTGACCCGTGAGCAGGAAATTCAGCGTAAGTTGCAAAACGGGTCAGCACTGGGTGACCTCCTGCGCCGTCGTGGCATGGGGGATGGTTCCAAGAAAGAAGAGGAACGTCGTCGGGGTGCGGGCTTTGGGGGTGGCATGCGCGGTGGGCTATCCGCCCTTGCGTTGTCAAACGTCTTGTACGGCGACAAGCCGACTACCTTACCGGATTTGTTTGAGGGCATGAAAAGTACCCTCGGCTCCGGTGGTGCGTCCTCAAACGATGACCTTATCCGGGCTATCCGTGAAAACAACCAAGGCGAGCTGCTGAGCAAAATCCTTGACCACGTCCGTGACATGAATGAGGAAGGGGTGTTTATCCTGAACTCACTCAACATGGGTGGCGATGACTTGCACGGCCCAAGTCCGGCCCCCGGTGGCTCAGGGGGCGGGGGAGGTTCTGGCGGTGGACTGTTCCGTCGTTGGGGTCGCTTAGGTCGTGACACCGCCGCAGGTGGATGGCGTCAGGCGAAGCGGGGCTTTAACGGTGCGCGTGCACGCGGGGGTCGTTTGGCGTCGTGGCTACGCGGTCGCTTCTCGGGCGGTGGTGCTGCCGGGACGAGTATGTTCCAGCGTGTACTGGGCGCGGGCAGTAATGCGCTGTCCGGTATCCGTTCCTTCGGTAAAGGGTTACTGGGTGCCCGGGACATCTACAATGCCCAAGGCAAAGTGGTCTTAAACGGTAAACGTTTAGCCGCGGGTGACTATTACCAGATGGGCAGCGGCCAAGGGAGTCAGATGACCCAACTGCATGCCCTCGGTGATATCCGCATGGGGCGGGACATTATCGATGCGCAGGGGAACGTGATTCTCTCTGCTGCCGATTTGGCCCAAGGGGGCGAGCTGACGTTTTACAACGGCTCGAACTGGAAGAAGCTCTTTGATGTTATCGGCAACAAAGCCGGCGAAGCAGGGCGGGGTATATTGTCACTGCCCGGTCGTCTGGCGAGTAAAATCAAAAATCCACTTCGCACAGTGAAGGACTGGTTTACTCAGGCTCCCGATATCTACGTCAAAGGCGAAACCAATCCTCGCCTGTTTGCTAACCGGATGCGTGAAGGTGAGTACCGCTTGAAAGAAGGCGGTCGTATCATCTATAAGGCCAGTGAGGTAACCGGTGCCGTGGTTGATGCGCAAGGCAACGATGTCATCACCGCCGAAGAGCTGGCTAACCCGAACTTCAAACTGGTTGACCGCTTTGGTCGTGCGGTGAAGTCTCCACTGGGTCGGATTGTGGGTCGGGTGACCGGGATCGGCAGGTTCGCTTTAAACGCCGCAGGCCGCATCCCGTCTATGATCCGTGGGGGGATCGACCGTATCAAGGGGATGGCACAAAACAACCCGTTGACCCGTTGGTGGAACAATCGCGGCTCGTCTTCAGACAGCAAATGGTTCTCCGGTAACAGCTTCTTTGGAGGCTTAGGCGGGGGCTCGAAGAAAACCAACCACATCTTACTGCGTATCTACAAACTCCTGAACAACCGTTTGTCCGGTGAGCCGGAAGACGAAAGTTGGGCAGATACCATGGAAGCGGGTGTGGGCGGGGGAAACACCTTCGGACGTGTCAAAGGTGGCATCGGTCGTGCCTTCCGCCGGGGTCGGGTGATGTCCCGTCGTCGTTGGGGCCGTCGCTTTAACAATGTGCGTAATCGCGTCAGTGGCTGGTTTGGTCGGGGTCGCGCTGCGGCGTCTGACCTCTACGGTCGTGGTGCGGACACCGCGCGTGATATTGCGAACCGTTACACCGGGGCGGAGCATGACATCGGTCTGCGTTATCTGGTCGAGCAACGCTTGGCGGGACGCGACGATGAAAGTGCCGAGTTCTACCGTGACCGACTGCACCGTCGTAAAGGGTTGAACGCGAACCGCTTGCGTTCTGATTTGAATGACACCGCAGAAGAAGCAACTGATGCCGCAGGTCGGGTTATCAACACCGGCAAGAAGAAGGTCCAGTCGGTTGGTCAGGCCATGCTCGAGAAACTCAACCGCATGGTTGGGCTGCAAGAGATTACGTGGTTTGACAAGATGCGCTCGTCAACGTTGGACGCCGGTGGGTCGGAAGGGTTTGTTCGTGGCATGATGAACAAGTTCACCCGACGCAACAAGTTTGGCGATTCAACCGAGAAGAAAGACTACCTCAACTTCTTCCGTCGTAAGCAGTCACACCGTGAAGGCGGTGAAGGGCATGCAGGCGGATCGGGTGGTGGTCAACGCGGTGGTGTGATGGGTGTCCTTGACAAACTCACGGGTGTTATCGGTGGGATTGGTGGGGTGCTCGGCACACTGGGTAGCGCATTGGGCTTTGTCGGCAAATGGGGCCTCTGGAAGCCCGGTAAGCTCTTGGCACGCGGTGGTTGGGCATTGGCTACCCGAGCACTGCCGTGGGCGGCACGGGCCATTGCAGCCCCGCTTATCTCGGGTGCGGCCGCCTTGGTGACCGCGATTGGTTGGCCGGCGATTGCCGTGGGTGCCGCGGTGGCCGGTATCGGCTACGCCGCGTACAAAATCGCCACCAACGTCCCGGCGAAATACCTTGACCGTATGCGTCTGGCCCAGTACGGCTTCCGTGATTACGAAAGCTGGAACAGCGACGACGGCGCGAAGGCGAGATACTTGGAAGACCAGCTGAAAGGGTACATCTCCTACAACAACGACGGGGCGGCAACGTTACGTGGCCTTTCTGCCAGCGATGTGGAGAAACTTGCAGCAGGCTTCGGGGTGAACAAGGACGAGAAATCGGAACTGGTCTCCTTCCATGCGTTTATGCTCCAGCGCTTTATTCCACTGTACCTGCGGTGGATGAGTTCTCTGCGTCAGCTTGAGAGCGATGTGGCCTTGAAAGACTTAGGTGATGTAACCAAAGTCAGCAAAGAAGACATGAAGACGCTGTTTGCCAAAAACAAATTGAGCAAGGACTCGCAATACCTGAAAGCCATCGAAGACCCCCGTAAAACGAACCAAGGTTTCTTCTCGAAGGCATGGGATACGATTACCTTCACCTCACCGGATTTACTGGGTGCGGACGATGTGATGGATGTGCAGAACGAAGTGGAGAAATCCATTAAGTTCCGTGCAGAAGGGTCAGCGGCAGTGCGCAATCACTTGGCACCCCCAACGGCCGACGGCACCAAAGTCTCCGGTGTGGCAGAGTCAGTTAACCGACTCGCTACCCTTGACCAAGAACGCCGTGACCACACCATCAAGAAAGAAGGTTGGGAAGACGGCAACGAACAGGTTACGGTTCAGGTTGATTACAACTCTGTGGTCCAGCAAAAAGACGTCGATGCCTTGCAGTCACTCCGAATGAAGGCATACGGTTTAACCACCCTCAATCCGGCACAGGTGAAATCCCTGTTACTGATGGAGCGGCTGGTCTACCCGAGTATCGATGTCAAGAACAACACGTATAAAGGCAGATGGCAAGAAGCGATTGATGCGTTAGTACCGGGGGGTTCCACTTCCGAGAAAGCCGACCGGTTGAAATACTGGTTCTACAACCGTTTCCTGCCGGTCTTCATGACGTACGTGGTGGGTGTGTATCGCTATCAGCCTACCGCCAATCCGCTGGACTTGAAACTCTCGGGTGGGTATCTCTACGAAGTCGGTTTAATGACCTCGCGTGCCTACTCCATGAAGAATGACATTCGTCAGTCTGTTTGGGACATTGCCATCAACCCGTTCGGGGGCGATGCAAACACGGTAGCCTCCTCGGTTAACGCAGAACTGGAATCCCTGCACGTCCTTTCGAAAGAAGCGGACTTGGCAGTGCGAAACCTGATGCGTGAAAACGAGAAGAAGCAAGGCCGTGCGCAGTGGAAACAGAAGGAACTGACCAAGGGCCTCTACGGCGGTGACGCCATGAGCGATAACGGGGTGAGTTCGTACGCCCCGGGCTCAGCAGAGGCATTGCGTGCCGCAGGCTTAAACGGTCGGAGCGGTTACGACGGGGGTGGTGGCGGTTGGAATGGCAGCAGTGAAATTGCTGCAGCCGGCGGGATTGGAAACTATGCCGCGATGACCACCGGTAGTACCAACATCTCCTTGGGACAGATGGGCGATGGCAACTACAAAGAGTTGGCAGAGAAGTATCCACGCGCGTCGTTGAATAACGTCGCCAACGTGAAGGCCATGATTGTGGATGTGGCGCAACGCCTCGGAGTACCACCGGGTGTTGCATTGGGGATGGCGTACGCCGAATCCAAGTTCAACTATAAAGCATGGAACAAAGACTCGGGAGCCGGTGGACTGTATCAGTTCATCAAATCCACGTGGTCAGGGAAAGGCAATGCGCCTGGAGAATTGCAGAACTACGGTAACAAGTTCGGGATTCCGAATGGGGCAACCCAGCTCGACCCGTACGCGAATACCCTGCTCGGCATTAACTTCATTCGTAACAACATCTCCAAAGCCCAAAGCGATTACGGCGGCCAAGTCCCTCCGGGCGTGGCGTACCTGTATCACTTCTTGGGTGCGGGCGATGCGGCCAAGTTCATGAAAGCCTACAAAGCCAACCCGAATGCACCGGCCAACTCTATCCGTTATTCCAGTAGCGGCGTGATAGGCAACAACATGTCGGTCTTCACCTCCGGCGGACGTATTCGAAGCTTTGCACAGGTGATGCAAGAGTTGAACGGGCGTATGGGTTCACAGGTTGCGAACATTGCCACCTCGAACTCCGATTTGGCGAAGCAAGCCATGTCGGGCCAGACACCGACTGACCCAGCACGGGCAGCAGGTGCTCCGGCAGCCAACGATGCTGATGGTGCAATCCAGACAGCACAGCGCAAGGATGTGGCATTGGCGCAGAAAGGTGCACAGGCGGCGAACGATGCGGCCACGCAAAGTGCGTCTGTGACAGCACCGAATCCTGCGGGCGTGTCAGCGGCGAACTCGCCGTCGGATATTGCTAAAGATGCCGATAACATCCAAGCGGCCGCGGAGGCAGATGGAATGTCTCCAGCAGATGCAGCCAAGGTCGGGGCGGGCTATGCCAATCAGGCAACGGCACAGGCCAAACCGCGTAAAGCCGCTAACGACATGCCTGTCTCGGCAGGTGATATGGTCACGGTGAGCCGTATGGATGAACTCATTGACATCGAGGGGCAGAGTCGCGACTACCTCTCGAAGATTTGGGAATACCTCCAGAAAGGTGGGACGCTCAACGGGGCACCACCTGCGGCTCAAGCTGCAACTGCGCCCGGCGCTGCCAGTCGTAAGACACAAACCACAGCACCGGCACCAACGCTTAACCTGAACCGGAAAGCGTCGTAG

Genome Context

Tertiary structure

PDB ID

11b421bb0952cc68a93214620cea4adefb071509b64d4df54359b3a6f5465c30

ColabFold

Source ColabFold

Method ColabFold

Resolution 0,4399

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence