Protein

View in Explore
Genbank accession
YP_012026693.1 [GenBank]
Protein name
tail fiber
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,88
TF
Evidence Phold
Probability 1,00
Protein sequence
MVTKTVIPTDITKLKNESLNKNNNLSDLADRAAAWLNVRPIGSTPLAGDPVGDYDAATKRWVENKINTGTVGPTMNGVMNYGVGDFHLRDSRAYIQPYEVVSDGQLLNRADWPELWAYAQMVGAIDDSVWLADKFQRGRYSSGDGTTTFRVPDKNGVQEGSIRALYGRGDGGNSGANGQLFESAAPNITGFFTTYASQTYAQVLGHTGGCFNANNNAFPDGRGDGIAPGSTALSGRYNTCEFNASISSPIYGASTDEILTRNFVGVWVIRASGGFVAANTSWSVINADKTTPNSGVVVFGGSVKSEYKSPSANVVAELKSSKVVNGAWGVSLTISDDRGIPVSIKYDSNGQFSTSHRPAGVGTGNSYSHCAYRAPDWWNNTAYSAFVPILGGGSGNSLKNYRSFACFGQISYPDSSNSYPRAAIAQVRDWALPDGEQGNGKSITVFTFIDNSFDIQYGYNDGSLNYIFSKSPICDERLKKNIQSIDTNIAISNIKQMPYKSYIYKNDENEQVRRGFIAQDLQKIDPQYVREYGDPGREKTLAIDENVMLLDSVAAVKWLINKVEELQEEINILKAK
Physico‐chemical
properties
protein length:576 AA
molecular weight: 62634,74360 Da
isoelectric point:5,63044
aromaticity:0,10417
hydropathy:-0,40347

Domains

Domains [InterPro]
Coil
11–31
Coil IPR030392 Coil
YP_012026693.1
1 576
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage EC100
[NCBI] 		2894397 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_012026693.1 [NCBI]
Genbank nucleotide accession
NC_105587.1 [NCBI]
CDS location
range 79471 -> 81201
strand -
CDS
ATGGTAACTAAAACAGTAATTCCTACGGATATTACAAAACTTAAAAATGAGTCACTTAATAAAAATAATAACCTGAGTGACTTAGCAGACCGTGCAGCAGCGTGGCTAAATGTAAGACCTATTGGTTCAACCCCTCTTGCTGGTGATCCTGTTGGGGATTATGATGCCGCAACTAAACGTTGGGTAGAGAATAAGATTAACACTGGTACAGTTGGACCCACTATGAATGGTGTTATGAACTACGGTGTTGGTGATTTTCACCTCCGAGATAGTCGTGCGTATATTCAACCATACGAAGTCGTTTCGGATGGACAGCTTCTTAATAGGGCTGACTGGCCTGAACTTTGGGCGTATGCACAAATGGTTGGGGCTATAGATGATTCAGTTTGGTTAGCAGATAAATTTCAGCGTGGCAGATACTCATCTGGGGATGGGACAACAACCTTTCGTGTTCCAGATAAGAATGGGGTGCAGGAGGGATCAATACGTGCTCTTTATGGCCGTGGAGATGGTGGGAATAGTGGTGCAAATGGGCAACTGTTCGAATCCGCTGCGCCTAATATTACAGGTTTTTTCACCACATATGCCTCTCAAACCTATGCCCAGGTATTAGGACATACAGGTGGTTGCTTTAATGCAAACAATAATGCGTTTCCTGACGGAAGAGGTGACGGAATCGCTCCAGGGTCTACAGCTTTATCTGGGCGTTATAATACCTGCGAATTCAATGCCTCAATATCAAGTCCGATTTACGGGGCATCAACAGATGAGATTCTTACACGAAACTTTGTCGGTGTGTGGGTAATCCGTGCTTCTGGTGGGTTCGTGGCTGCTAATACCTCGTGGAGTGTTATTAATGCGGATAAAACAACCCCCAATTCAGGTGTTGTCGTTTTTGGAGGTAGTGTTAAATCTGAGTATAAATCACCCAGTGCAAATGTAGTAGCGGAACTAAAATCAAGTAAAGTGGTTAATGGTGCATGGGGTGTTAGTTTAACTATATCAGATGATAGAGGAATCCCTGTAAGCATTAAGTATGACAGTAATGGTCAGTTTTCAACATCTCATAGGCCGGCCGGAGTCGGTACAGGGAATTCCTATAGTCACTGCGCTTATCGCGCGCCAGACTGGTGGAATAACACAGCGTATAGTGCCTTCGTTCCAATTCTTGGGGGTGGTAGCGGTAATTCACTAAAAAACTATAGATCTTTTGCTTGTTTTGGACAAATATCTTATCCTGATTCTAGCAATAGTTATCCTAGAGCTGCAATTGCTCAAGTAAGGGATTGGGCACTGCCAGATGGTGAACAAGGTAATGGCAAGAGTATTACCGTGTTTACATTTATTGATAATTCATTTGATATTCAATATGGGTACAACGATGGTTCGTTAAATTATATTTTTTCAAAATCTCCGATTTGTGATGAAAGACTAAAGAAAAATATTCAGTCCATCGATACTAATATTGCAATAAGTAATATTAAGCAGATGCCCTATAAATCATACATCTATAAAAATGATGAGAATGAACAAGTGAGGCGCGGTTTTATAGCCCAGGATTTACAGAAAATAGATCCCCAATATGTACGGGAATACGGAGATCCAGGAAGAGAGAAAACGTTAGCCATCGATGAAAATGTTATGTTGCTTGATTCCGTTGCTGCGGTTAAGTGGCTTATTAATAAAGTTGAAGAATTGCAAGAAGAAATAAATATATTGAAAGCTAAGTAA

Tertiary structure

PDB ID
8f3d39317944000ec8f76c41047f1678d9157b9d1f7909c248c34e4a83007511
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6564
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequences of 17 Escherichia coli bacteriophages isolated from wastewater, pond water, cow manure and bird feces Vitt,A.R., Ahern,S.J., Gambino,M., Holst Sorensen,M.C. and Brondsted,L. 2022-10-20 — GenBank