Protein

View in Explore
Genbank accession
AUR83516.1 [GenBank]
Protein name
coil containing protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MRLIINMHKEVHSMLNTFTEQNMTSINKLTQTPTLEDNDLSVVWQNSSGRTRAITIENLRHFIQSTDPNADAFVKAELVGDELILTAHDETETRIDINILPDHSVTELKDMPDTLVSGEYLKVNDAGNGFVLTPASEASATLLVRENGQLKGAANVLDFGNATISLANKIANIKLNVQFANTRTMIFDDNEKEYLSVDRTTPVIVTEEIDSLVLCKTTEPESETDAPKVRKASVGELASGFSVCPDGTSAGTQILQASSGTYSLTQMTFAVGAAVDDSVYIGPDGKLTLDQSDYVVGWVLTDGVIIDIDLYNATVTAKSQSEDTPTFKRVDIDTAGSGNSNFAASIHQDGELHTIIDATRELRIKYKDISTGDTTTVAGIDNNQAQFLVPILQGVDPVALKKDIPDTDDLARKSQPNAFTESQTINNAEFKVRDGEGSSIFRVRPDNNTVVSNVPVKVNDKLECAELITRIVNSPDNIVNLKAYGSTNISMGSEYTQTQKPMLFNKIVEFYDNALYYGGTTEPKNLMTKEAVEALIPDDNGGGDSNWHLLNKVSYESSTVNTNSTGQGTIHEFLGSSSTSAVHTHTFNESGVVWIANFQVSSARDKAVEVKSSVSSVGMTGFKIPVNMITRFSYCKETNKMYSEASYIRPELIDFTPNSDFNAKSGYDRVSSGGGSTHRIEYWENGTIFKISNSKIEVHLLEGMNADSNRHGYVKYINSRNDDVTFEWYDRNGNRINNSTVPSTCPANTVVDIFANYDTDDYFLTFGQSIAISGSALEEIVVNSEVFDHIDISGFDSENTQLKIVKKSFTDKDLISIPVELPEGYDVLVSSVICKVNGKLKKQPFEYQYENGILRVHLNEVCSGIIIAELIK
Physico‐chemical
properties
protein length:872 AA
molecular weight: 95768,58640 Da
isoelectric point:4,71789
aromaticity:0,07454
hydropathy:-0,30757

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUR83516.1
1 872
Domain Start End Length (AA) Confidence
N-terminal 1 185 185 0,9917
Central domain 186 427 243 0,1616
C-terminal 428 872 444 0,3856
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-185
Central
186-427
C-terminal
428-872

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.036.O._10N.286.45.C3
[NCBI] 		1881296 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio lentus
[NCBI] 		136468 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR83516.1 [NCBI]
Genbank nucleotide accession
MG592420 [NCBI]
CDS location
range 15359 -> 17977
strand +
CDS
GTGAGGCTTATAATAAACATGCACAAGGAAGTGCACTCTATGTTGAACACGTTCACGGAGCAGAACATGACATCGATCAATAAACTTACCCAAACGCCAACACTGGAAGATAATGACCTTTCCGTTGTATGGCAGAACTCAAGTGGCCGCACTCGCGCCATTACCATTGAAAACCTACGCCATTTCATCCAATCAACCGATCCAAACGCTGATGCATTCGTAAAGGCTGAGTTGGTTGGTGATGAGTTAATCCTAACCGCACATGATGAGACTGAAACTAGGATTGATATTAATATTCTTCCTGACCATTCAGTTACTGAATTAAAGGACATGCCTGACACTTTGGTTTCCGGTGAGTACCTAAAGGTAAATGATGCCGGTAATGGCTTTGTTTTAACCCCGGCAAGTGAAGCAAGTGCGACCCTCTTAGTTAGGGAGAATGGACAACTAAAGGGGGCCGCTAACGTTCTTGATTTCGGCAACGCCACAATCTCACTCGCAAATAAAATCGCAAACATCAAGCTGAACGTTCAGTTTGCAAACACTAGAACAATGATATTTGATGATAACGAGAAAGAATACTTGTCCGTTGATCGAACGACTCCGGTCATTGTCACTGAAGAAATAGACAGCCTAGTGCTTTGTAAGACTACTGAACCAGAGAGCGAAACTGACGCACCTAAAGTAAGAAAGGCGTCTGTAGGCGAGCTTGCAAGCGGATTCTCTGTATGTCCCGACGGTACATCAGCAGGTACGCAAATACTTCAAGCAAGCTCTGGCACTTACTCACTGACACAGATGACCTTTGCAGTTGGCGCGGCGGTAGATGATTCAGTTTATATTGGCCCTGACGGCAAGCTAACGCTAGACCAATCAGACTATGTTGTTGGATGGGTTCTAACTGATGGTGTGATAATTGATATTGATTTGTATAACGCGACCGTTACAGCCAAATCACAAAGTGAGGATACACCAACCTTCAAGCGTGTTGATATCGACACGGCAGGAAGTGGAAACTCTAACTTTGCTGCGTCTATCCATCAAGATGGCGAGCTACATACTATTATTGATGCAACTCGCGAACTAAGAATTAAATACAAGGACATAAGCACAGGAGACACAACGACTGTAGCCGGAATAGACAATAATCAGGCTCAGTTCTTAGTGCCAATCCTTCAGGGTGTTGACCCTGTAGCGCTTAAAAAAGATATACCTGATACAGACGACCTTGCCAGAAAGAGCCAGCCTAACGCATTTACCGAAAGCCAAACTATTAATAACGCTGAGTTTAAGGTGAGGGATGGTGAAGGCTCTAGCATTTTCAGAGTGAGACCAGATAACAATACGGTTGTAAGCAATGTGCCAGTTAAAGTTAATGATAAATTAGAGTGCGCTGAGTTAATTACACGCATAGTTAATTCACCGGATAACATTGTAAACCTGAAAGCTTACGGTAGCACAAATATAAGCATGGGAAGCGAGTACACGCAGACCCAAAAGCCTATGCTGTTTAACAAGATTGTTGAATTCTATGATAATGCTTTATATTACGGTGGCACAACGGAACCTAAGAACCTAATGACAAAGGAGGCGGTCGAGGCGTTAATTCCTGATGACAATGGTGGCGGAGATAGTAATTGGCATCTTTTAAACAAAGTTAGCTATGAAAGTTCAACCGTTAACACCAACTCAACAGGTCAAGGAACTATTCATGAGTTCCTTGGTTCAAGCTCGACAAGCGCCGTTCATACTCACACGTTTAATGAATCTGGTGTGGTTTGGATTGCTAACTTCCAAGTTTCGAGCGCAAGAGATAAAGCAGTAGAGGTTAAATCCTCTGTCAGTAGCGTTGGGATGACCGGCTTTAAAATCCCTGTAAACATGATCACCCGATTTAGCTACTGCAAAGAAACAAATAAAATGTACTCAGAGGCTAGTTACATCAGGCCAGAGCTTATTGATTTCACCCCTAACTCAGACTTTAACGCAAAGTCAGGCTATGACCGCGTATCTAGTGGCGGTGGCTCAACGCACAGGATCGAATACTGGGAAAACGGCACAATCTTCAAGATTTCCAACAGCAAGATTGAGGTTCATCTACTAGAGGGAATGAACGCCGACAGCAACAGGCATGGTTATGTTAAGTACATTAACTCGCGCAATGATGACGTTACGTTTGAGTGGTATGACCGAAACGGAAACCGAATTAACAATTCAACAGTTCCGAGCACTTGCCCTGCTAATACGGTTGTTGATATATTCGCTAACTACGATACGGACGATTACTTTTTAACGTTCGGCCAGTCAATAGCGATAAGCGGTAGCGCGCTGGAAGAGATAGTTGTTAATTCAGAGGTGTTTGACCATATTGACATTAGTGGTTTTGATTCTGAAAATACCCAACTTAAAATTGTTAAGAAGTCATTCACGGATAAGGATTTGATATCAATACCCGTGGAGTTACCTGAAGGCTACGATGTGCTAGTATCCAGTGTAATTTGCAAGGTTAATGGAAAGCTGAAAAAACAACCTTTCGAATATCAATATGAAAATGGAATTTTACGAGTTCATTTAAATGAAGTGTGCTCAGGAATTATTATAGCGGAGCTTATCAAATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
36bcb1422ca9547ee27cbe16b19bfc515afaa87e8614f2477697ea0cbbafcedc
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5102
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank