Protein

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Genbank accession
AUR95796.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MSLIDRDKGDGGGNTLPLHFGAYTNDTIAVGTDPDAPTYLTNIALLPSSSPEFTIITDGDGVQWVRNDSNKTFSMQGTVTYQTVQGAGGRAELKLWSERSSDDGVTFSENLFSLRTSEVPNNSDNSQTKSSGVGSWSPGESIRWAMYNTGPGALALDGPTDTVNGGNVVEGLTFYWQLNATT
Physico‐chemical
properties
protein length:182 AA
molecular weight: 19366,82290 Da
isoelectric point:4,23771
aromaticity:0,08791
hydropathy:-0,45604

Domains

Domains [InterPro]
DC_1629
STR
1–182
DC_1629
AUR95796.1
1 182
Architecture
STR
STR 1-182
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.213.O._10N.222.54.F10
[NCBI] 		1881410 No lineage information
Host Vibrio sp.
[NCBI] 		678 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR95796.1 [NCBI]
Genbank nucleotide accession
MG592583.1 [NCBI]
CDS location
range 11398 -> 11946
strand +
CDS
ATGAGCTTAATTGATCGAGATAAAGGTGATGGTGGTGGCAACACGCTACCACTACACTTCGGAGCTTACACTAATGACACAATAGCAGTTGGCACAGACCCTGATGCGCCTACATACTTAACTAATATTGCGTTACTTCCATCTAGCTCACCTGAGTTTACTATTATCACTGATGGTGACGGGGTTCAGTGGGTAAGGAATGATTCAAATAAAACATTCTCGATGCAAGGCACTGTAACCTATCAAACAGTTCAGGGCGCTGGTGGTAGGGCTGAGTTAAAGTTGTGGTCTGAAAGAAGTAGTGATGATGGTGTCACATTTTCCGAAAACTTATTTTCACTTAGAACTAGCGAAGTACCAAATAACTCAGACAATAGCCAAACTAAATCATCCGGTGTTGGCTCTTGGAGCCCGGGCGAGTCAATTAGATGGGCTATGTACAATACAGGTCCTGGAGCTTTAGCTCTTGATGGCCCAACAGATACAGTCAACGGGGGCAACGTGGTAGAAGGCTTAACTTTCTACTGGCAACTAAACGCAACAACATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
9a1de1e5304c6a9eb2b4a607ea89658d48acef01455537053f9adccf8b26e51e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7528
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank