Protein

View in Explore
Genbank accession
UYE97060.1 [GenBank]
Protein name
virion structural protein
RBP type
TF
Evidence RBPdetect
Probability 0,85
TF
Evidence RBPdetect2
Probability 0,93
Protein sequence
MANVFGGNSSGTCSTSRQNLSSSRQTSSSGGSASSSPNVFSGGGNSGSCSTGGQILSAPKTTVSSAGQVSSSPNVLKGGGSGVNREIDIRDYYTRRQIDKALASKIDSTSVYTNTEVYNKSEVDEKITALSLTNYATDTELSTAVSALESQVNNNLASNYYQSSILYTRAQVDSLISGVSVSGDYVSRAPSSITEITISPSSASLPFSLLVRSSNNTETTEVQRWENTSTDFLAAIYADGKAKFTNYTSIGENVSSGNIALFTNNKRVSGVANPVSPSDAVNKLYMETFITTTLDDVINDVDENYIVDALEY
Physico‐chemical
properties
protein length:312 AA
molecular weight: 32900,37060 Da
isoelectric point:4,62814
aromaticity:0,07051
hydropathy:-0,32564

Domains

Domains [InterPro]
DC_2099
STR
1–180
DC_2099 DC_0363
UYE97060.1
1 312
Architecture
STR
ATT
STR 1-180 | ATT 220-309 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Cyanophage S-TIM61
[NCBI] 		2969441 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Synechococcus sp. CC9605
[NCBI] 		110662 Cyanobacteriota > Cyanophyceae > Synechococcales > Synechococcaceae > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UYE97060.1 [NCBI]
Genbank nucleotide accession
OP053361 [NCBI]
CDS location
range 62330 -> 63268
strand +
CDS
ATGGCTAATGTATTTGGTGGAAATAGCTCGGGTACTTGTTCTACAAGCAGACAAAATTTGTCCTCTTCTAGACAAACAAGCTCTAGCGGCGGGTCAGCAAGTTCTTCTCCTAACGTTTTTAGTGGTGGCGGCAATTCTGGAAGTTGTTCTACAGGAGGGCAAATATTATCTGCTCCTAAAACAACAGTTTCAAGTGCTGGTCAAGTAAGCTCTTCTCCAAATGTTCTTAAAGGTGGCGGCTCGGGTGTAAATAGAGAGATAGATATTAGAGACTATTATACTAGAAGGCAAATTGACAAAGCCCTTGCTTCTAAAATAGATAGCACAAGTGTCTATACTAATACAGAAGTATACAATAAGTCCGAAGTTGATGAAAAAATTACGGCTTTAAGTTTAACCAATTATGCCACAGATACAGAGCTATCAACGGCAGTTTCTGCGTTAGAAAGCCAAGTAAATAACAACCTTGCGAGTAATTACTATCAAAGTTCTATCTTATACACTAGGGCTCAGGTTGATAGTTTAATTTCTGGGGTCTCGGTTTCTGGAGATTATGTTTCTAGAGCTCCTTCTTCTATAACAGAAATAACTATTTCTCCTAGCTCTGCTTCTCTACCTTTTAGTTTACTAGTTAGATCGTCAAATAATACGGAAACAACTGAAGTACAAAGATGGGAAAACACATCAACAGACTTTCTTGCAGCAATTTATGCTGATGGTAAGGCTAAATTTACAAATTACACAAGTATAGGTGAAAATGTAAGTAGTGGAAATATCGCGTTATTTACAAATAATAAAAGAGTTTCTGGTGTGGCAAATCCAGTAAGCCCATCTGATGCTGTAAATAAGCTATATATGGAAACATTTATCACAACAACGTTAGATGACGTTATTAATGACGTTGATGAAAATTACATAGTTGACGCTTTAGAGTACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d46c785029f5794324982b662b0beab8e8f48f7f65ff0dca02e7c6982357997c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7030
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Widespread yet persistent low abundance of TIM5-like cyanophages in the oceans Baran,N., Carlson,M.C.G., Sabehi,G., Peleg,M., Kondratyeva,K., Pekarski,I. and Lindell,D. — — GenBank