Protein

View in Explore
Genbank accession
QBX25362.1 [GenBank]
Protein name
tail fiber protein and host specificity
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MLLTIHDASLQKVAFIDNSKQKTLNYYDDVWFRSLETGSSTFEFTVYKKAIQSDTNHRKTYNYLNERAFVSFTYKGRSYVFNVMSVEENEKTIKCYCENLNLELINEYANPYKATKPMSFKEYCDAMDLLNFTLLSIGINEISDYKRTLEWEGQDTKLARLLSLAKKFDAEIEFDTQLNADSTIKDFRVNVFHENDESHQGVGKIRSDIQLTYKKNLKSIKRKIDKTGIYNAVRPTGKREDGTIVTIGGLSAYSENNADGIREFYQSGEMLYAPLSVQLYPAAFTKETMADQWIRKDLEVESESPEVIRSAGIRNLKKNAYPALTYEVDGFVDVEIGDTINIRDNGFSPILLVVARVSEQKISFTNPQNNKTTFANFKALENQLSSGIQSALERLFENAKPYSIKLSTDNGVMFKNNIGESTVTPTLYRGDKIIPNVTWRWSLDGQVATGLFYTVRGNMIESTSVLTVAAYVGNTEVAVDEISFVNVLDGKLGTPGPKGVDGRTTYIHTAWANSPDGRKDFSLESDVNMLYRGEYKDYEIADSTDPLRYQWVKVKGDKGDKGDKGERGDRGLPGLQGARGDQGIPGVRGADGRTSYTHIAYADSADGHTNFSVSASNRLYMGVCVNFTQQDSTNPDDYAWSLIKGADGANGLPGKAGADGRTPYFHTAYANSSDGRQDFSVTDSRGKKYLGTYTDYAMADSTDYKKYTWSLIKGDDGRGIANVTNYYLLSALSTGITTTTTGWSETPQVPTAQYRYHWHYRVELYTDGTSKTTTPAVIGIHGEKGDKGDRGLQGLQGPRGEQGIAGVKGADGKTQYTHIAYADNAAGGGFSQTDQNKAYIGMYQDFNMADSNNPSAYRWTKWKGSDGAQGIPGAKGADGRTPYFHVAYAESADGRTGFSLTQTGNKRYMGTCTDYTQNDPTDPTRYRWVDMVGSVDVGGVNLIRNSAFPLDFKHWSNETPAFAKIVTHGFYYNSQKPMFMIENRGSGEIVFGTNRFEVEKNTTYTLNFRGFANSATRDIDVFFLGRKNGETKDFTVVNLLIGRRKMSTSNCEDITVTFNSGDADNAYIRFDNNGTDTSTKADFYFGEIDLYKGNFKRKWQPNPEDLQFQIDSKADNVLTQEQLNALSEQARDLQANLEAKASKETLDNWIKAYQSFVQANEKAVSKSEKELIAASKRVALLEQTIGDMKIQTDFIDTYFTQSNEGLIFGKNNGSATIKISQDRISMFSAGNEVMYISQGVIHIDNGVFTKTLQIGRFREEQYHLNADMNVIRYVGGLL
Physico‐chemical
properties
protein length:1278 AA
molecular weight: 142717,99560 Da
isoelectric point:5,78231
aromaticity:0,11111
hydropathy:-0,58302

Domains

Domains [InterPro]
DC_0266
STR
1–717
DC_0266 G3DSA:1.20.5.320 DC_0002
IPR007119
Unmapped
62–374
IPR007119 PTHR24637 Coil Coil
IPR010572
ENZ
146–378
IPR010572 G3DSA:1.20.5.320 DC_1328
QBX25362.1
1 1278
Architecture
STR
STR 1-1277 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage Javan254
[NCBI] 		2548074 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Streptococcus himalayensis
[NCBI] 		1888195 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBX25362.1 [NCBI]
Genbank nucleotide accession
MK448886.1 [NCBI]
CDS location
range 30357 -> 34193
strand +
CDS
ATGTTGTTAACCATTCATGATGCAAGTTTGCAGAAGGTGGCTTTTATTGATAATAGCAAGCAAAAGACCCTGAATTATTATGATGATGTTTGGTTTCGGAGTTTAGAAACTGGTTCATCCACCTTTGAATTTACGGTTTATAAAAAAGCGATTCAGTCAGATACAAATCATCGAAAGACTTATAACTATTTGAATGAGAGAGCTTTTGTATCCTTTACGTATAAAGGGAGAAGTTATGTCTTTAATGTGATGAGTGTTGAGGAAAATGAAAAGACGATTAAGTGCTACTGTGAAAATTTGAATTTGGAACTTATCAATGAGTATGCTAATCCTTATAAGGCTACTAAACCAATGAGTTTTAAAGAATATTGCGATGCCATGGATTTGTTGAATTTCACTCTTTTATCCATTGGAATCAATGAAATCTCTGATTATAAGCGAACCTTGGAATGGGAAGGACAAGATACTAAACTGGCTCGTCTGCTGTCTCTGGCCAAGAAATTTGATGCAGAGATTGAATTTGATACTCAGTTGAATGCTGATAGTACGATTAAGGATTTTAGGGTAAATGTCTTTCATGAGAATGATGAGAGCCATCAAGGGGTGGGAAAAATACGTTCCGACATCCAATTAACGTATAAGAAAAATCTCAAATCTATCAAGAGAAAGATTGATAAGACTGGGATTTACAATGCTGTTCGTCCGACTGGCAAACGTGAGGATGGGACTATTGTGACGATTGGGGGCTTGTCTGCTTATTCTGAGAACAATGCGGATGGTATCCGTGAGTTTTACCAGTCTGGTGAGATGCTTTATGCTCCTTTGTCTGTCCAGCTCTATCCAGCAGCATTTACCAAGGAGACAATGGCGGATCAATGGATTCGGAAAGATTTGGAAGTTGAATCAGAAAGTCCAGAGGTGATTCGGTCTGCTGGTATTCGGAATTTAAAGAAAAACGCCTATCCAGCTCTGACCTATGAAGTGGATGGTTTTGTGGATGTGGAAATCGGTGATACGATTAACATTCGAGATAACGGTTTTAGTCCAATTTTGCTAGTGGTTGCTCGGGTCTCTGAACAGAAAATCAGTTTTACAAATCCCCAAAATAATAAGACTACTTTTGCTAATTTTAAGGCCTTAGAAAATCAGTTATCCAGTGGCATTCAATCAGCACTTGAGCGTTTATTTGAAAATGCCAAGCCATACAGTATCAAGTTATCCACAGACAATGGAGTGATGTTTAAAAATAATATCGGTGAATCAACAGTTACTCCTACCCTCTATCGTGGAGACAAGATAATTCCTAATGTGACTTGGCGATGGTCATTAGATGGTCAAGTTGCGACTGGTCTGTTTTATACTGTCAGAGGCAATATGATTGAAAGTACTTCTGTTCTAACAGTTGCTGCCTATGTAGGCAATACTGAGGTAGCGGTTGATGAGATTAGTTTTGTCAATGTTTTAGATGGAAAGTTAGGAACACCTGGTCCTAAGGGAGTTGATGGTCGCACCACCTATATTCATACAGCTTGGGCAAATAGTCCAGATGGTCGTAAAGACTTTTCTTTAGAATCAGATGTGAATATGCTGTATCGAGGAGAGTATAAGGACTATGAGATTGCCGATAGTACAGACCCTTTACGCTATCAATGGGTCAAGGTAAAGGGAGACAAAGGAGATAAGGGTGATAAAGGAGAGCGAGGAGATAGAGGTTTACCCGGACTTCAAGGGGCAAGAGGGGATCAAGGAATTCCCGGAGTAAGAGGAGCTGATGGTCGTACTTCTTATACCCATATTGCCTATGCCGATAGTGCCGATGGGCATACTAATTTTTCAGTCAGTGCTAGCAATCGTCTTTATATGGGGGTCTGTGTAAACTTTACGCAACAAGACAGCACGAATCCAGATGATTATGCTTGGAGCTTAATTAAGGGTGCTGATGGGGCTAATGGTTTACCAGGTAAGGCAGGAGCTGACGGTCGTACTCCTTATTTCCATACGGCTTATGCTAATTCGTCAGATGGACGACAAGATTTCTCTGTGACAGATAGTAGGGGTAAGAAGTATCTTGGGACTTATACCGACTATGCAATGGCTGATAGCACTGATTATAAGAAATACACATGGTCACTTATCAAGGGTGACGATGGGAGAGGGATTGCTAATGTAACGAACTACTATCTTTTGTCTGCTCTATCAACTGGTATTACAACTACTACGACAGGGTGGTCTGAAACGCCACAAGTTCCAACTGCTCAATACCGTTATCATTGGCATTATCGCGTGGAACTATATACAGATGGTACGAGCAAGACTACGACTCCAGCTGTGATTGGTATCCACGGTGAAAAAGGTGATAAGGGAGACCGTGGTCTCCAAGGCTTACAAGGCCCTAGAGGTGAACAGGGGATTGCTGGTGTTAAAGGAGCAGATGGTAAAACGCAATATACGCATATTGCTTATGCGGATAATGCTGCTGGTGGAGGCTTTAGCCAGACAGACCAAAATAAGGCTTATATTGGTATGTATCAAGATTTCAATATGGCAGATAGTAACAATCCTTCTGCTTACAGATGGACAAAATGGAAAGGTTCAGATGGAGCACAGGGGATACCTGGTGCAAAAGGAGCAGACGGTAGGACACCATATTTTCACGTTGCCTATGCAGAGAGTGCAGATGGTCGTACTGGTTTTAGTTTGACCCAGACGGGGAATAAGCGTTATATGGGGACTTGCACGGATTACACTCAAAATGACCCAACAGATCCAACGAGATACCGTTGGGTAGATATGGTGGGGAGTGTTGATGTTGGAGGAGTAAATCTAATTCGGAATAGTGCTTTTCCACTGGATTTCAAACATTGGTCTAATGAAACTCCTGCATTTGCAAAAATTGTTACACATGGTTTTTATTACAATTCTCAAAAGCCAATGTTTATGATTGAAAATAGAGGTTCTGGAGAAATTGTGTTTGGAACCAACCGTTTTGAAGTTGAAAAGAATACAACATATACCTTGAATTTTCGAGGTTTTGCTAATTCAGCGACAAGGGATATTGATGTTTTCTTTTTAGGACGTAAAAATGGTGAAACAAAAGATTTTACGGTTGTTAATCTCTTGATAGGCAGACGAAAAATGTCAACAAGTAATTGTGAAGATATTACGGTTACTTTCAATTCTGGAGATGCAGATAATGCCTATATAAGATTTGATAACAATGGTACAGATACATCGACTAAAGCAGACTTTTACTTTGGAGAAATTGATCTCTATAAAGGAAATTTCAAACGTAAGTGGCAACCTAATCCAGAGGACTTACAATTTCAAATTGATTCAAAAGCAGACAATGTTCTCACTCAAGAACAGTTAAACGCTCTGAGTGAACAGGCTAGGGATTTGCAGGCTAATCTGGAGGCAAAAGCCAGCAAGGAAACCTTGGATAACTGGATTAAGGCGTATCAGAGTTTTGTGCAGGCCAATGAAAAAGCAGTGTCTAAATCGGAGAAAGAATTGATTGCTGCTTCTAAAAGAGTTGCGTTGTTAGAACAAACGATTGGTGATATGAAAATCCAAACAGATTTCATTGATACTTATTTTACACAGTCAAATGAAGGTTTGATTTTTGGTAAGAATAATGGTTCAGCGACTATCAAAATCAGCCAAGACCGTATTTCCATGTTTTCTGCTGGGAATGAAGTCATGTATATCAGTCAAGGGGTTATCCATATTGATAATGGGGTATTTACAAAGACTTTGCAGATTGGGCGTTTTCGCGAAGAACAGTATCACTTAAATGCAGATATGAATGTAATTAGATATGTAGGAGGGCTATTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
23c19219fd13d36a7e055a3f235ce1ff9c0647f3911d67eab4d34a0684a52fee
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2726
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Prophages and satellite prophages are widespread among Streptococcus species and may play a role in pneumococcal pathogenesis Rezaei Javan,R., Ramos-Sevillano,E., Akter,A., Brown,J. and Brueggemann,A.B. 2018-12-20 — GenBank