Protein

View in Explore
Genbank accession
QIG67367.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,72
Protein sequence
MKLVFWFFVALLTLTETAQAGPVIPAISAFASTAIGGFIVKAVIGLAISIGTSLLKGMMTKKQSGQKDPGTSLQLQVGGDNSLFFPLGRAATGGVRVYCGTWTGDGVSFGKTPNEYAVDVIALSAIPLSSTNIILWMNDQKVTVLTSESKTEMGWPINEYRYKGKDYAWIDFFDGTQTTTSSYLLSRFGSHPDYPWQSDMIGRGVAYAIFTARYQSNGLWSGGFPSLTFELPSIKLYDIRKDSTAGGSGTHRWNNPSTWQASNNNMVRAYNVMRGIYYGDEWVYGGQDWPAFRLPAASWMAGMNACDLVVGGVNQFHGGGMIECDVEAAKSVEELLRGASGLIAEVGGVYKIRIGAPGAAVFAFTDDNIIVTREQGYSPFPGLEDTYNIVRLSYTEPAEKWASKEAPERRDATMIASDDNRELPMSVELPWTLNNPTAQRIGLAALLNGRRFRRHQHYLPPEAWLLEPLDVVSWSSAHNGYVNKTFDIEQISGESTLLQGVTIRENDPTDYDWNPETDELPYTTVPLIPSFPAPQQMTGWQVQPAILKDNDGEDRRPSIQVFFDAELTDVARVRVQVRLDGDTNAMFDGEVPYDPFVLAPSVILQGQFLPNTDYQARGIFVPYTDRQTEWSDWLDVTTPNVLFTDKDVYLPGVLDGVNEIISDATKWVRDGVRQTILEQQRIARLTMDQDFGDYTDRQKLRTELVSVQQGVTASYSNAIVVATGPNSALSLRIEELTTYVNDVVATAISTLSAEIDAQGTALSQAITALSAANTSGDVATANFRMTATAGPDGVSARIAMEARAGGVGAFKSAGLFIDVPEDDADPSRVVILADQFVVADPDDSVTQQFPLIFQDGELTLNVANIGTVNAGLITNPGGKMNIDIDNGTIEIYD
Physico‐chemical
properties
protein length:893 AA
molecular weight: 97502,27310 Da
isoelectric point:4,53640
aromaticity:0,09742
hydropathy:-0,15174

Domains

Domains [InterPro]
DC_0187
STR
6–883
DC_0187
IPR032876
ATT
327–480
IPR032876
QIG67367.1
1 893
Architecture
STR
ATT
STR
STR 6-326 | ATT 327-480 | STR 481-883 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhizobium phage RHph_TM3_3_9
[NCBI] 		2509558 No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIG67367.1 [NCBI]
Genbank nucleotide accession
MN988470.1 [NCBI]
CDS location
range 22612 -> 25293
strand -
CDS
ATGAAACTCGTTTTTTGGTTCTTCGTCGCGCTTCTGACGTTGACAGAGACGGCGCAAGCCGGACCGGTCATTCCCGCGATCAGCGCGTTTGCTTCGACCGCGATCGGCGGGTTCATCGTCAAAGCGGTCATCGGTCTTGCGATTTCGATCGGCACAAGCCTTTTGAAAGGCATGATGACGAAGAAGCAATCGGGTCAGAAAGACCCCGGCACGAGCCTGCAACTTCAGGTCGGCGGCGACAACTCGCTATTTTTCCCGCTCGGCAGGGCTGCGACCGGCGGCGTTCGTGTTTATTGCGGCACGTGGACGGGTGACGGTGTTTCCTTCGGTAAAACACCCAACGAATACGCGGTTGACGTCATCGCATTGTCGGCAATACCGCTTTCGTCGACGAATATCATTCTATGGATGAACGACCAGAAAGTGACGGTTCTGACCAGCGAGTCAAAAACCGAAATGGGATGGCCGATCAACGAATACCGCTACAAGGGCAAAGATTACGCGTGGATCGATTTTTTCGACGGCACGCAAACCACGACCAGTTCATACTTGCTTTCTCGCTTCGGTTCCCATCCCGATTACCCTTGGCAATCGGACATGATCGGACGCGGTGTTGCTTACGCGATCTTCACGGCTCGATATCAAAGCAATGGTCTGTGGTCCGGCGGTTTCCCTAGCCTGACCTTCGAACTGCCGTCGATCAAGCTTTACGACATCCGCAAGGATTCGACCGCCGGCGGCTCCGGGACACATCGCTGGAACAACCCGTCGACATGGCAGGCGTCGAACAATAACATGGTGCGCGCCTATAACGTGATGCGCGGCATCTATTACGGCGATGAATGGGTTTACGGCGGTCAGGATTGGCCCGCGTTCCGTTTGCCGGCCGCGTCGTGGATGGCGGGAATGAACGCCTGTGATTTGGTTGTCGGTGGCGTCAATCAGTTCCACGGCGGCGGGATGATTGAATGTGACGTCGAAGCGGCGAAGTCGGTCGAAGAACTGTTGCGCGGCGCTTCCGGCCTGATTGCCGAAGTCGGCGGCGTCTACAAAATCCGCATCGGCGCGCCCGGCGCGGCTGTCTTCGCGTTCACCGACGACAACATTATCGTGACCCGCGAACAGGGTTATTCGCCGTTCCCCGGCCTTGAAGACACGTATAATATCGTACGTTTGTCCTACACGGAACCGGCGGAAAAATGGGCAAGTAAGGAAGCGCCGGAACGCCGCGACGCTACCATGATTGCGAGCGACGACAATCGCGAATTGCCGATGTCGGTCGAACTGCCGTGGACGCTGAACAATCCGACCGCGCAACGCATCGGCCTTGCCGCACTCCTGAACGGTCGGCGCTTCCGTCGTCATCAGCACTATTTGCCGCCGGAAGCGTGGTTGCTTGAACCGCTTGACGTGGTGTCGTGGTCATCTGCCCACAACGGCTATGTGAACAAGACGTTCGATATCGAACAGATCAGCGGTGAATCGACGTTGCTTCAGGGCGTCACGATCCGCGAAAACGACCCGACCGACTACGACTGGAACCCGGAAACGGATGAATTGCCGTACACGACGGTTCCGCTTATCCCTAGCTTCCCGGCTCCGCAACAAATGACCGGTTGGCAGGTGCAGCCGGCAATTCTGAAGGACAACGACGGTGAAGATCGTCGGCCGTCGATTCAGGTGTTCTTTGACGCCGAGTTGACGGACGTTGCGCGCGTGCGCGTTCAGGTCCGGCTTGACGGCGACACGAACGCGATGTTCGACGGTGAAGTTCCGTATGACCCGTTCGTTCTCGCACCGTCCGTGATCCTTCAGGGTCAATTCCTGCCGAACACCGACTATCAGGCGCGCGGAATATTCGTTCCGTACACCGATCGTCAAACCGAGTGGTCGGATTGGCTGGACGTCACGACCCCGAACGTTCTGTTCACCGACAAAGACGTTTACTTGCCGGGCGTGCTTGACGGCGTGAACGAAATTATCAGCGACGCGACCAAGTGGGTTCGTGACGGCGTTCGCCAAACGATCCTTGAACAGCAACGCATTGCGCGACTGACCATGGATCAGGATTTCGGCGATTACACCGATCGTCAGAAGCTTCGCACGGAACTTGTAAGCGTTCAGCAAGGCGTGACCGCAAGTTACAGCAACGCGATCGTCGTCGCAACCGGACCGAATTCCGCGCTGTCACTCCGCATCGAAGAACTGACGACCTACGTGAACGACGTCGTCGCAACCGCCATTTCTACCCTTTCGGCGGAAATCGACGCACAGGGAACCGCATTGTCACAGGCCATCACCGCCTTGTCGGCCGCGAACACATCCGGAGACGTGGCGACAGCGAATTTCCGGATGACCGCGACCGCTGGACCGGATGGCGTATCCGCTAGGATCGCCATGGAAGCGCGCGCCGGCGGTGTCGGCGCATTCAAGTCCGCCGGCCTGTTCATTGACGTTCCGGAAGACGACGCCGACCCGTCGCGCGTGGTAATCCTCGCCGACCAGTTCGTGGTTGCCGACCCCGACGATTCGGTGACGCAACAATTCCCATTGATTTTTCAGGATGGCGAACTTACTCTGAATGTGGCAAACATCGGCACCGTGAACGCTGGTCTGATCACCAATCCCGGCGGTAAGATGAATATCGACATCGATAACGGAACAATCGAGATATACGATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
757f0e149b5fb388d74d5971183564568c3221725e0cee34c88b0249de1caa2d
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3226
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Patterns of diversity and host range of bacteriophage communities associated with bean-nodulatin bacteria Vann Cauwenberghe,J., Santamaria,R.I., Bustos,P., Juarez,S. and Gonzalez,V. 1998-01 — GenBank