Protein

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Genbank accession
YP_009822014.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MSTKKVQNSSQSGKTNKGFGAGTKPGVEKVLTKLKAVNEELDAELAKVAVNTTGGVVVEDNPAAVAPDVVNSVDDEIDVDFSFGRTKAYGLTPPEQRTRRKRGTDYKDEPIIYIAGVKQEGVKLDKAPKNAGGGEYRYNSNNPLAVSGSAAQRFNPGEVITEEPIQWYHVVLPEIDIYITQGSELTIEDRVNAHSGWEGEEGDWIGQAKDTKPELIIIGSVVRCSSISLGSLARFNNSNVETNGHIDTINSRIHGCRIFAYNSIDLYNCGLYSSRIDNNNRLIIRNSNYLRNLHISGFDNVDLLKVHNSGEFRIHAGWQPTAGLGLNIADCHLTDFSGDFRGSVEQYAKEYGDKKPWQGNGMVIRRRTDYGYFAGSAPVPFVRCGDYNISTSNNLYLAKEIDQVSFPKEKAPLAYQPQFGGGFRSDYQPPLSMEDNSYTMGLRGGKLWEKARKDCFTNPNNHEQHKRPIGAIGDNLIQSLVEQIKSRIKLYVELSVLTEV
Physico‐chemical
properties
protein length:500 AA
molecular weight: 55350,23980 Da
isoelectric point:6,25174
aromaticity:0,08600
hydropathy:-0,54140

Domains

Domains [InterPro]
DC_0897
STR
1–500
DC_0897
Coil
Unmapped
27–51
Coil
YP_009822014.1
1 500
Architecture
STR
STR 1-500
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009822014.1
1 500
Domain Start End Length (AA) Confidence
N-terminal 1 92 92 0,9068
Central domain 93 387 296 0,9176
C-terminal 388 500 112 0,3770
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-92
Central
93-387
C-terminal
388-500

Taxonomy

  Name Taxonomy ID Lineage
Phage Edwardsiella phage pEt-SU
[NCBI] 		2562142 Uroviricota > Caudoviricetes > Chimalliviridae > Petsuvirus pEtSU >
Host Edwardsiella tarda
[NCBI] 		636 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009822014.1 [NCBI]
Genbank nucleotide accession
NC_048182 [NCBI]
CDS location
range 120142 -> 121644
strand +
CDS
ATGTCCACAAAGAAAGTACAAAACTCTTCGCAATCTGGTAAGACAAATAAAGGTTTTGGTGCTGGAACCAAACCTGGTGTCGAAAAGGTACTGACTAAATTGAAAGCCGTCAACGAAGAGCTTGATGCTGAGCTGGCAAAGGTTGCTGTTAACACTACTGGAGGTGTGGTGGTGGAAGATAACCCCGCTGCAGTTGCTCCGGATGTTGTCAATTCTGTTGATGACGAAATTGACGTTGACTTTAGCTTCGGTCGTACTAAAGCTTATGGCTTGACCCCACCAGAACAGCGTACTCGTCGTAAGCGCGGCACTGACTATAAAGACGAACCTATCATCTATATAGCTGGTGTTAAGCAAGAAGGTGTTAAGCTGGACAAAGCACCTAAGAACGCCGGAGGAGGCGAGTACCGTTACAACAGTAATAACCCACTGGCTGTAAGTGGGTCTGCTGCTCAACGTTTCAACCCAGGTGAAGTAATCACTGAGGAACCTATTCAGTGGTATCACGTTGTCTTGCCCGAGATTGATATCTATATTACTCAGGGTTCCGAACTGACCATCGAAGATCGTGTTAACGCACATTCCGGTTGGGAAGGCGAAGAAGGCGACTGGATTGGTCAGGCTAAAGACACCAAACCTGAATTGATCATTATTGGTTCTGTCGTTCGTTGCAGCTCTATCTCTCTGGGAAGTCTGGCTCGTTTCAACAACTCCAACGTTGAAACCAATGGACACATCGATACGATAAATTCTCGCATCCATGGTTGTCGTATCTTTGCTTATAACTCTATTGATCTGTACAACTGCGGTTTGTACTCCAGTCGTATTGACAATAATAACCGTCTGATCATTCGTAATTCTAACTACCTGCGGAACTTACATATCAGTGGGTTTGATAACGTTGACCTGCTGAAAGTCCACAACAGTGGTGAGTTCCGAATTCATGCTGGTTGGCAGCCAACCGCTGGTCTGGGATTGAATATTGCTGATTGTCATTTGACCGATTTCAGCGGAGATTTCCGTGGGTCTGTTGAACAATATGCTAAAGAGTATGGTGATAAGAAACCATGGCAGGGTAACGGTATGGTAATCCGTCGTCGTACCGACTACGGTTACTTTGCAGGTTCTGCCCCTGTTCCGTTTGTGCGTTGTGGAGATTATAATATCTCCACTTCTAACAACCTCTACCTGGCTAAAGAAATTGATCAAGTCTCCTTCCCTAAAGAGAAAGCCCCATTGGCTTATCAACCACAGTTCGGCGGTGGTTTCCGTTCTGACTATCAACCACCATTGAGTATGGAAGATAACTCTTACACCATGGGTCTGCGTGGTGGTAAGTTATGGGAGAAAGCTCGTAAGGATTGTTTCACTAATCCTAACAACCACGAACAACACAAACGTCCTATCGGTGCAATTGGGGATAACTTGATTCAGTCGCTGGTTGAACAAATCAAATCTCGCATTAAACTGTACGTCGAATTGAGCGTATTAACCGAGGTGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
81b79d1611fdceddfd28a3e80d0b2f2f368d4eed2c96cbf4f52c048760431102
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4069
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50