Protein

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Genbank accession
QDK01443.1 [GenBank]
Protein name
minor tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MALPNLPTLGQNPWYTPRTNWDNAVEAELEGRLSEETLTQQFAAFEMATAYGAVGDGVTDNSTALANGLIAAQGRALYLPAGEYIVNSATRLALTGNFSSIVGDPSGAGTIIRFTNASGGLDIGDGVTNVYENRLSNVLISGNSVATTVVRCRKVYEPYFENVRIEGSSSAAGSTLVLMNESGQLDADRIVLANAPIGIRLTGTIDPIANIRLGNFYNLGECVRWESSSASKFALSDSWIEACTDVFTVNRPGASFSIGEVLMSDVRVLKVAGNQYLFRVIAVSSINSQVLDFEQCYVDAQASTTPLFDLTVAPTGGTVRISGRRNTVLYANVGTMLQANAGQAWNTLLADFREINGVSPALWYPTPLTLSYPTPPVLSGAGVPAVAAPRGSLYQRNDAFPGFYPGVYAKLTDGDTTWHAVGTQKVLYVKTTSYAITLADEVVVANGASVTITLPAAGLWHGRFWTVKNINAASATVASSGGTIDGATTKSLAQWQAATFISDGSNWLTI
Physico‐chemical
properties
protein length:510 AA
molecular weight: 53993,00490 Da
isoelectric point:4,87129
aromaticity:0,09020
hydropathy:0,09020

Domains

Domains [InterPro]
IPR012334
STR
35–354
IPR012334
IPR011050
STR
43–225
IPR011050 DC_0954
IPR011050
STR
45–225
IPR011050
IPR024535
ENZ
49–124
IPR024535
QDK01443.1
1 510
Architecture
STR
ATT
STR 35-267 | ATT 268-510
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QDK01443.1
1 510
Domain Start End Length (AA) Confidence
N-terminal 1 61 61 0,9732
Central domain 62 368 308 0,9882
C-terminal 369 510 141 0,9874
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-61
Central
62-368
C-terminal
369-510

Taxonomy

  Name Taxonomy ID Lineage
Phage Microbacterium phage LeeroyJenkins
[NCBI] 		2593338 No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QDK01443.1 [NCBI]
Genbank nucleotide accession
MN096358 [NCBI]
CDS location
range 27268 -> 28800
strand +
CDS
ATGGCTCTCCCAAACCTCCCTACCCTCGGTCAGAACCCGTGGTACACCCCGCGTACGAACTGGGATAACGCTGTCGAGGCGGAACTTGAGGGGCGACTGTCGGAAGAAACCCTTACCCAGCAGTTTGCGGCCTTTGAGATGGCAACCGCATATGGGGCCGTGGGTGATGGGGTGACGGATAACTCTACAGCCCTTGCTAACGGCCTTATCGCCGCGCAGGGTCGAGCGCTTTATCTGCCCGCCGGGGAGTACATTGTCAACTCGGCTACCCGGCTGGCTCTAACGGGTAACTTCTCCAGCATTGTCGGTGACCCTTCGGGGGCGGGGACGATTATCCGTTTCACCAACGCCTCGGGTGGCTTGGATATTGGCGACGGCGTTACAAATGTCTATGAGAACCGTCTTTCAAACGTCCTTATCTCGGGTAATAGCGTGGCCACCACCGTCGTTAGGTGCCGGAAGGTCTATGAGCCGTACTTCGAGAATGTGAGAATCGAGGGGTCTTCCTCCGCCGCCGGATCAACTCTCGTCCTCATGAATGAGAGCGGACAGTTGGATGCCGACCGTATCGTTTTGGCTAACGCCCCTATCGGTATTCGGCTCACCGGAACTATTGACCCTATCGCCAATATCCGCCTCGGGAACTTCTACAACCTGGGTGAGTGTGTCCGGTGGGAGTCCAGTAGCGCATCTAAGTTCGCGCTTTCCGATTCTTGGATTGAGGCGTGCACGGATGTCTTTACGGTGAACCGGCCAGGAGCTTCCTTCAGTATCGGGGAAGTTCTGATGTCGGATGTGCGTGTCCTTAAGGTGGCGGGTAACCAGTACCTCTTCCGGGTCATTGCGGTATCATCGATCAACTCTCAGGTTCTCGATTTCGAGCAGTGCTACGTGGACGCCCAGGCGTCTACTACCCCCCTGTTCGACCTGACCGTAGCCCCCACGGGTGGCACGGTGCGAATTAGCGGACGCCGCAATACGGTTCTCTATGCCAACGTGGGCACGATGCTTCAGGCTAACGCAGGCCAGGCTTGGAATACCCTTCTGGCGGACTTCCGAGAGATCAACGGGGTATCTCCGGCGCTGTGGTACCCCACTCCTCTCACTCTCTCCTACCCCACCCCTCCGGTATTGAGCGGTGCGGGTGTTCCCGCTGTGGCGGCCCCGCGAGGTTCCCTGTACCAGAGAAACGACGCTTTCCCGGGATTCTACCCCGGGGTGTACGCAAAGCTCACGGACGGGGATACCACCTGGCATGCGGTCGGCACCCAGAAGGTTCTCTACGTTAAGACAACCTCCTATGCGATAACTCTTGCCGATGAGGTCGTAGTTGCCAATGGGGCGAGTGTCACCATTACCCTCCCCGCCGCGGGTCTTTGGCACGGTCGATTCTGGACGGTGAAGAACATAAATGCCGCTTCCGCTACCGTTGCAAGCTCGGGCGGCACCATTGACGGCGCAACCACAAAGTCCCTAGCTCAGTGGCAGGCGGCAACGTTCATTAGTGATGGCTCTAACTGGCTTACGATCTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
78b829399aec7ea0b4d8f0512a2d60d692b752e4a3fbf58500d55c829bd4a02e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8342
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50