Protein

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Genbank accession
YP_008433566.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,65
Protein sequence
MSVNGVSDSPLLEKAVNGDQTRVPIGAPVITNNKSQMSKSIQLLTPGADLVTPELTQFEAFGVEGKEAFRNDKTKGVEFRDRTSPNDKLIAEWAYDPVEGCLVLVRVNKKEERIYGFLRQESLGVGPTGPRGNPGKDGQDGRDGRDGADGDPGCPGDPGPPGDEGYPGAEGNPGLIGIQGPEGCEGASGDRGLVGPQGRPGFEGSRGLTGPSCADDRFGNKGPQGIAFGKGVLFGAAQLSNPEAAIVGLDDDGIDAVAPPGGWDGSSTPPPTSQPTNPPPPPTASAGISLCTNHGNVKNSCGNTVNAWYSTWANYAAPGGAKGLSTLPIARQNTAFWPNSIVMCGTLRKNASYTFELSTPNGVASSLFLNCAIVLQTDYVGGTSRKTMTLTADSSIRLRFLNNAPRIPTWCSLKIYDGATGALLYKTGQNAQNAGLSGANASYVIDPNWRGNAAVQQYN
Physico‐chemical
properties
protein length:459 AA
molecular weight: 47711,43790 Da
isoelectric point:5,13668
aromaticity:0,06754
hydropathy:-0,44662

Domains

Domains [InterPro]
DC_2321
ATT
1–101
DC_2321 PTHR24637
IPR008160
STR
126–181
IPR008160
DC_1391
STR
165–430
DC_1391
YP_008433566.1
1 459
Architecture
ATT
STR
ATT 1-101 | STR 126-430 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_008433566.1
1 459
Domain Start End Length (AA) Confidence
N-terminal 1 334 334 0,6127
Central domain 335 448 115 0,0559
C-terminal 449 459 10 0,9769
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-334
Central
335-448
C-terminal
449-459

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage PaBG
[NCBI] 		1335230 Uroviricota > Caudoviricetes > Baikalvirus >
Host Pseudomonas aeruginosa PAO1
[NCBI] 		208964 Bacteria > Proteobacteria > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_008433566.1 [NCBI]
Genbank nucleotide accession
NC_022096.1 [NCBI]
CDS location
range 196649 -> 198028
strand +
CDS
ATGAGCGTAAACGGTGTGTCCGACTCTCCTCTTTTGGAGAAAGCAGTCAACGGAGATCAGACAAGAGTGCCGATAGGCGCACCGGTGATTACAAACAACAAGAGCCAGATGTCGAAAAGCATCCAGCTCCTGACACCCGGTGCTGATCTCGTTACGCCTGAACTCACCCAGTTCGAGGCGTTCGGCGTGGAAGGCAAGGAGGCCTTCCGCAATGATAAAACCAAGGGCGTCGAGTTTCGTGACCGTACGTCCCCGAATGACAAGCTGATCGCGGAGTGGGCCTACGATCCTGTAGAGGGTTGTCTGGTACTGGTTCGCGTCAACAAGAAAGAAGAACGCATCTACGGGTTCCTGCGCCAAGAGTCGCTCGGTGTTGGTCCCACTGGTCCTCGCGGTAACCCTGGCAAAGACGGCCAAGACGGACGCGATGGGCGTGACGGTGCTGACGGTGATCCTGGCTGCCCTGGCGATCCAGGTCCTCCCGGCGATGAGGGTTATCCTGGTGCTGAAGGTAATCCAGGCCTCATCGGTATTCAAGGTCCAGAGGGCTGTGAAGGTGCATCCGGCGATCGGGGTCTTGTAGGACCACAAGGTCGCCCAGGCTTCGAGGGTTCTCGTGGTCTGACGGGCCCCTCTTGCGCAGATGATCGGTTCGGCAACAAGGGCCCGCAAGGTATTGCGTTTGGCAAGGGTGTCTTGTTCGGCGCTGCGCAGCTTTCAAACCCGGAAGCTGCCATTGTTGGCTTGGACGATGACGGCATCGACGCTGTTGCTCCTCCTGGCGGTTGGGACGGTTCTTCGACTCCACCTCCAACTTCGCAGCCGACAAACCCACCGCCACCGCCGACTGCCTCTGCTGGCATTTCTCTGTGTACGAATCACGGTAACGTCAAGAATAGTTGTGGCAATACCGTTAACGCGTGGTACTCGACATGGGCAAACTACGCGGCGCCCGGCGGTGCCAAGGGCCTGTCCACTCTGCCTATCGCTCGGCAGAACACGGCGTTCTGGCCGAACAGCATCGTCATGTGCGGCACGCTGCGTAAGAATGCGAGCTACACCTTTGAGCTGTCCACGCCAAACGGTGTCGCATCTTCTCTGTTCCTGAACTGCGCTATCGTCCTGCAGACAGATTACGTCGGCGGTACTTCCCGCAAGACCATGACCCTGACAGCAGATTCGTCGATTCGTCTGCGCTTCCTGAACAACGCCCCACGAATCCCGACGTGGTGCTCGTTGAAGATTTATGACGGTGCTACTGGTGCGTTGCTCTACAAGACAGGACAGAATGCACAGAATGCGGGCCTTTCTGGCGCAAACGCTTCCTACGTTATCGATCCTAACTGGAGAGGTAACGCTGCTGTTCAACAATACAACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
378183bd11ba9f96dbb609865c5e071bf0177bb196d7965c579c6cb3f2f07344
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4371
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50