Protein

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Genbank accession
ALO80060.1 [GenBank]
Protein name
structural protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MAEPIIKKENIEDLPISKVINLQDTLDNFTGGGDVYNNIFRDSSDSGLTGTIDGTNTSFTVSNGSYNPGTLNVFVEGQLFVDGHGVIETTPGTGVFTFEIAPETGTSLYVTYQVGNTVTDIVDGSIIESKLSSDVISNFKNTPNGYVSPREYNSIMDGITDDRDTFESTLIAARAVGKRVIVDRDIFLDVSETSSSIILESGDWIEGINGANIIVNNLLTPAFLMVLTSNITFKNINIVYDQTYDATVSGSTEDSNNFISFLNNYLVSNRGITLTNSNFGWTGRSSLRYTFMIDACEDILFDNVTVKSKGETADKFMIGAFKLKWEWAKNSTITSNVGDTSICKNITFKDIILDGYIMGIQGVVDGFKVDNFKAYRYSDVQTASGTEIGGTAFWMAPPHLFYLNTDASPLYNTQNVEIRNTIDYGILVGSNDHRSETSGYCTSLKMINTVTNVYVDNYTSLRRDGLGEIQDMSNATYKNIYSESEIGIFDSSVGFNAFRFLGTIENVHFENVTLKDKSTYLEIYPLDLASGNNSSMTNFNVIIEGELNTDIYGCYGISGSNNKITNSFLKIGNHTSTQDFRGVIYHDNTALLSGANNHYEVIVQGWRDLGSTPSSIRPRVLLASALNPNNNYAKLVDISNNYVAEQINGVLTGTLIKSEIVTLGTGTSQALSMNIPTGFALSKVIAETITALTSGTNVTIGTGNITDKANLIANVYETTGKVDFNINENSHYSGSRTIYINSDTDFASSGVIKVTIELKRYSETSFNKSDNVIANVTDNSVTTSKIVDANVSLAKLSPSVQSTLNQAILSYETLEENEILVVKSDGTIEGVPNFTFTGALLQVGSTASGIYSQLGDNTFSFARNADSSIRQIGGADINFQTQNSSASNTTRLKIEGGSDNGFVELYNSTLKKNTLDTAPANSSATGTAGEVRFTSTGVYICIATNSWIDGSGSTF
Physico‐chemical
properties
protein length:955 AA
molecular weight: 103482,44750 Da
isoelectric point:4,54402
aromaticity:0,09215
hydropathy:-0,15487

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
ALO80060.1
1 955
Domain Start End Length (AA) Confidence
N-terminal 1 161 161 0,9894
Central domain 162 651 491 0,9823
C-terminal 652 955 303 0,7908
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-161
Central
162-651
C-terminal
652-955

Taxonomy

  Name Taxonomy ID Lineage
Phage Cellulophaga phage phi4:1_13
[NCBI] 		1747284 Uroviricota > Caudoviricetes > Lightbulbvirus >
Host Cellulophaga baltica
[NCBI] 		76594 cellular organisms > Bacteria > Pseudomonadati > FCB group > Bacteroidota/Chlorobiota group > Bacteroidota

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ALO80060.1 [NCBI]
Genbank nucleotide accession
KT962245 [NCBI]
CDS location
range 62097 -> 64964
strand -
CDS
ATGGCAGAACCAATTATAAAAAAAGAAAACATTGAAGACTTACCAATTTCAAAGGTAATAAATCTTCAAGATACATTAGACAACTTCACTGGTGGAGGAGATGTATACAATAACATATTTAGAGATTCAAGTGACTCAGGCCTTACTGGAACTATAGATGGCACCAACACATCTTTCACGGTATCTAATGGATCTTATAATCCAGGAACACTTAATGTATTTGTTGAGGGGCAGTTATTTGTTGACGGGCACGGTGTCATAGAGACTACTCCTGGAACTGGAGTTTTCACATTTGAAATTGCTCCTGAGACAGGGACTAGTTTATATGTAACATATCAAGTTGGTAATACTGTTACTGACATAGTAGATGGTTCTATTATTGAAAGTAAATTATCGTCTGACGTAATATCAAACTTTAAGAATACTCCAAATGGATATGTGTCTCCTAGAGAATACAATTCTATTATGGATGGAATTACTGATGATAGAGATACTTTTGAATCAACATTAATTGCAGCAAGAGCGGTAGGTAAAAGAGTAATAGTAGACAGAGATATATTTTTAGATGTGTCAGAAACATCATCATCTATTATTTTAGAAAGTGGCGATTGGATTGAAGGTATAAATGGAGCTAATATTATAGTTAACAATTTGTTAACTCCAGCATTCTTAATGGTTCTAACAAGTAATATAACTTTTAAAAATATAAACATTGTTTATGATCAAACATATGATGCTACTGTAAGTGGTTCTACTGAAGACTCAAACAACTTTATTTCATTTTTAAATAACTATTTAGTTTCAAATAGAGGAATAACTTTAACTAATTCAAATTTTGGATGGACAGGTAGAAGCTCATTAAGATATACTTTCATGATTGATGCATGTGAAGATATATTATTTGATAATGTAACAGTAAAATCTAAAGGTGAAACTGCCGATAAGTTCATGATCGGAGCATTTAAACTTAAATGGGAATGGGCTAAAAACTCTACTATCACATCTAATGTAGGTGATACATCTATATGTAAAAATATAACTTTTAAAGATATCATTTTAGACGGATACATAATGGGTATCCAAGGTGTTGTAGATGGATTTAAAGTAGATAATTTTAAAGCGTACAGGTACAGTGATGTTCAAACAGCATCTGGAACTGAAATAGGTGGTACAGCTTTTTGGATGGCACCTCCACACCTATTCTATTTGAACACTGATGCTTCTCCTTTATACAATACTCAAAACGTAGAAATAAGGAATACAATTGATTACGGAATATTGGTAGGTTCTAATGACCATAGGTCAGAAACTAGCGGATACTGTACATCATTAAAAATGATAAATACAGTAACTAATGTTTATGTTGATAATTATACATCCTTAAGAAGAGATGGTTTAGGTGAAATTCAAGACATGAGTAATGCTACTTATAAAAACATCTACTCAGAATCAGAAATAGGTATCTTTGATTCAAGTGTAGGATTTAATGCCTTTAGATTTTTAGGAACAATTGAAAATGTTCATTTTGAAAATGTAACATTAAAAGATAAGTCTACATATCTAGAAATATACCCCTTAGATTTAGCATCGGGTAACAACTCATCAATGACTAACTTTAATGTTATAATTGAAGGTGAATTAAATACAGACATTTACGGTTGTTACGGTATATCAGGAAGTAATAATAAAATTACAAACTCTTTTTTAAAGATAGGTAATCATACTTCAACACAAGATTTTAGAGGTGTAATATACCACGATAATACAGCTTTGTTATCAGGAGCTAACAATCACTATGAAGTAATAGTTCAAGGATGGAGAGACTTAGGTTCTACTCCTTCATCTATTAGACCAAGAGTATTACTTGCTTCTGCATTAAATCCAAATAACAACTATGCAAAACTAGTTGATATTAGTAATAATTATGTAGCCGAACAAATAAATGGAGTTTTAACAGGTACTTTAATTAAGTCTGAAATTGTAACATTAGGCACAGGCACTAGCCAAGCTTTATCAATGAACATACCAACAGGTTTTGCTTTATCTAAAGTAATTGCAGAAACTATTACAGCGTTAACATCTGGAACAAATGTGACAATAGGGACAGGTAACATTACAGACAAAGCTAACTTAATAGCTAATGTGTACGAGACAACAGGTAAGGTTGATTTTAACATAAATGAAAATTCTCATTATAGTGGAAGCAGAACTATATACATTAACTCAGATACAGACTTTGCTAGTTCAGGAGTAATAAAAGTAACTATAGAATTAAAAAGATACAGTGAGACATCATTTAATAAGTCAGATAATGTAATAGCTAATGTAACAGATAATTCAGTAACAACTTCCAAAATAGTTGACGCTAATGTTTCTTTAGCTAAACTAAGTCCTTCTGTACAATCAACACTTAACCAGGCAATATTAAGCTATGAGACTTTAGAGGAAAACGAGATTTTAGTGGTTAAGTCTGATGGTACAATAGAAGGTGTTCCTAATTTTACATTCACAGGAGCATTACTACAAGTTGGTTCTACAGCTTCAGGAATTTATAGCCAACTAGGAGATAATACATTTTCTTTTGCTAGAAATGCAGATAGTTCAATACGACAAATAGGTGGTGCTGATATAAATTTTCAAACACAAAATAGCTCTGCATCAAACACTACCAGATTAAAAATAGAAGGTGGTTCTGATAATGGTTTTGTAGAGCTGTATAACTCCACATTAAAAAAGAACACTTTAGACACAGCTCCTGCAAACTCATCTGCAACAGGAACAGCAGGAGAAGTAAGATTTACATCTACAGGAGTTTATATTTGTATAGCTACAAATAGTTGGATTGATGGCTCTGGATCAACATTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c72f91317c9c6c8a9b834ff1c7f6cb53a69d8537e3b56639db9957a755a1f8b9
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6551
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Large-scale maps of variable infection efficiencies in aquatic Bacteriodetes phage-host model systems Holmfeldt,K., Solonenko,N., Howard-Varona,C., Moreno,M., Malmstrom,R.R., Blow,M.J. and Sullivan,M.B. 2016-06-27 — GenBank