Protein

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Genbank accession
XNZ85308.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MAKTVGSLPSLIQGVSEQEPHNRAPGKMWESVNMMDSPTRGKVRRRGTVMSDHKPLASAVTGALAEAGRMQEYTFIIDGREFSLTYRPSASALGKDYFAALLAKDTGDFYDIVYEDSTWVDNLIAGGVSAIACVGRYVYIAGNTTLPRATSTEAWNSPANLQKLSGWIREGAYSRKFTARLTLTDGTTKDYSYTTKPAAYPELLDTSDIPFYKPGNADPKEPDPEYQKKVNDRVNAYEGNKTAWIKEAAEDIVPANIARKIAELIVADGYFASSMESCVVIDDPAFNDIRMLDDGAGTLVSYAGKEVSDPQFVTLYHWSGKVVRVRPSGGGDKESYYLKAVPLDGADGWAKVEWVETAGVVHEIHNVVSQLIVDVPNKKAYVAQDGQGLKSLAPHMGDHPLYKSNAVGDAVTAPLPHYFGRPITCMTVFQDRLMLSADNIVNFSRSSDYLNFFRQTVLNVQENDPIEIFAHGSEGDTIKKAVMFERDLVLFGELRQYAISGREFLSPTNPNINVIGAFEGGATANPIVSGNFLFFGKHANERTGLHQMQPGDTPQTTVVYEVSQELDSWIKGEPVQLLGMTQPDMVTYRTDADSSIWYTYKYSDDRSVGRIMSSWGKQQYAPELGSVASITHYRGDQFVVTLRTAGGKDYWFADRLSLNADLSKLPHLDSQVPYGSETEWHKAVQEKLFVAATAASDYYLMGAPRPQAEDFIEQAPGVEPALVVGSVSPAYFQLTNPYMRDSQGQPILNGRLTLTSYGFHLADTGGLSAYVLAPTKDRTLLFEGRVLGHTSNIIGRQPVFSGMRTVSVGKETRACIVELRSEDWQPLRVTGAEWSGQVFMPRARGLY
Physico‐chemical
properties
protein length:847 AA
molecular weight: 93353,94250 Da
isoelectric point:5,47720
aromaticity:0,10153
hydropathy:-0,31653

Domains

Domains [InterPro]
DC_0058
STR
1–847
DC_0058
IPR058003
TTP
235–842
IPR058003
XNZ85308.1
1 847
Architecture
STR
STR 1-847
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XNZ85308.1
1 847
Domain Start End Length (AA) Confidence
N-terminal 1 158 158 0,9883
Central domain 159 400 243 0,3535
C-terminal 401 847 446 0,3987
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-158
Central
159-400
C-terminal
401-847

Taxonomy

  Name Taxonomy ID Lineage
Phage Stenotrophomonas phage S28phi1
[NCBI] 		3162002 Viruses > unclassified bacterial viruses >
Host Stenotrophomonas maltophilia
[NCBI] 		40324 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Lysobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XNZ85308.1 [NCBI]
Genbank nucleotide accession
PQ492158 [NCBI]
CDS location
range 39126 -> 41669
strand -
CDS
ATGGCTAAGACCGTTGGCAGCTTGCCATCACTGATTCAGGGCGTCTCCGAACAGGAGCCGCACAACCGGGCACCCGGTAAAATGTGGGAGAGCGTCAACATGATGGACTCCCCGACTCGTGGTAAGGTGCGCCGTCGCGGTACTGTCATGTCCGACCACAAGCCTCTGGCGTCCGCAGTAACAGGCGCGCTCGCCGAGGCAGGGCGTATGCAGGAGTACACCTTCATCATCGACGGGCGGGAGTTCAGCCTCACGTACCGCCCGAGTGCCAGTGCGTTGGGCAAGGATTACTTTGCCGCGCTTCTGGCGAAGGACACCGGGGATTTCTACGACATCGTTTACGAGGACAGCACATGGGTGGACAACCTGATCGCGGGCGGAGTATCGGCAATCGCCTGTGTCGGCCGCTACGTGTACATCGCGGGGAACACCACCCTGCCGCGCGCGACTTCTACCGAAGCGTGGAACTCACCCGCCAACTTGCAGAAGCTGTCGGGCTGGATTCGAGAGGGCGCGTACAGCCGGAAGTTCACGGCACGCCTCACGCTGACTGACGGCACGACCAAGGACTACAGCTACACGACCAAGCCCGCAGCGTACCCGGAACTGCTGGACACCAGCGACATCCCGTTCTACAAGCCGGGCAACGCCGATCCGAAGGAACCCGACCCGGAGTACCAGAAGAAGGTCAACGACCGAGTGAACGCCTACGAGGGCAACAAGACTGCGTGGATCAAGGAAGCTGCCGAGGACATCGTACCGGCCAACATCGCACGCAAGATCGCTGAGTTGATCGTGGCTGACGGGTACTTCGCAAGCTCGATGGAGTCCTGCGTGGTGATCGATGATCCGGCGTTCAACGACATCCGCATGCTCGACGACGGCGCCGGTACGCTGGTGTCCTACGCAGGCAAGGAGGTGTCCGATCCGCAGTTCGTCACTCTATACCACTGGTCAGGTAAGGTCGTCCGTGTTCGCCCGAGTGGCGGCGGCGACAAGGAGAGCTACTACCTCAAGGCCGTGCCTCTCGACGGCGCTGACGGCTGGGCCAAGGTGGAGTGGGTAGAGACTGCTGGTGTGGTGCACGAGATTCACAATGTCGTGTCCCAGCTGATCGTGGACGTGCCGAACAAGAAGGCGTACGTTGCACAGGACGGTCAGGGCTTGAAGTCTCTGGCTCCGCACATGGGTGATCACCCGCTGTACAAGTCCAACGCTGTGGGCGATGCCGTCACCGCTCCGCTACCGCACTACTTCGGTCGACCGATCACCTGCATGACGGTGTTCCAAGATCGACTGATGCTCAGCGCTGACAACATCGTGAACTTCTCGCGGTCCTCGGATTACCTGAACTTCTTCCGGCAGACCGTGCTGAACGTGCAGGAGAACGACCCCATCGAAATCTTCGCCCACGGCTCCGAGGGTGATACGATTAAGAAGGCGGTCATGTTCGAGCGTGACCTCGTGCTGTTCGGCGAGTTGCGCCAGTACGCGATCAGTGGTCGTGAGTTCCTGTCCCCAACGAATCCGAACATCAACGTGATCGGTGCGTTCGAGGGCGGAGCTACTGCGAACCCGATTGTCTCCGGTAACTTCCTGTTCTTCGGGAAGCACGCGAACGAGCGTACGGGTCTGCACCAGATGCAGCCGGGCGATACTCCGCAGACCACCGTGGTGTACGAGGTGTCGCAGGAACTGGACTCGTGGATCAAGGGCGAGCCGGTGCAGCTGTTGGGCATGACTCAGCCGGATATGGTGACGTACCGCACGGATGCCGACAGTTCGATTTGGTACACGTACAAGTACAGTGATGATCGCTCCGTTGGCCGTATCATGTCCAGCTGGGGCAAGCAGCAGTACGCGCCGGAACTCGGCTCGGTTGCTTCCATCACGCACTACCGTGGCGATCAGTTCGTTGTCACCCTGCGCACCGCAGGCGGCAAGGACTACTGGTTCGCCGACCGGCTTAGCCTCAACGCTGACCTGTCGAAGCTCCCGCATCTGGACTCCCAAGTCCCGTACGGTAGCGAGACGGAGTGGCACAAGGCCGTGCAAGAGAAGCTGTTCGTGGCAGCAACGGCAGCATCGGACTACTACCTGATGGGCGCACCGCGTCCGCAGGCGGAGGACTTCATCGAGCAGGCTCCGGGTGTTGAACCCGCATTGGTCGTGGGCAGCGTATCGCCCGCGTACTTCCAGTTGACGAATCCCTACATGCGTGATTCGCAGGGTCAGCCCATCCTCAATGGGCGACTGACTCTTACTTCGTACGGCTTCCATCTGGCGGACACCGGCGGCCTCTCGGCCTACGTGTTGGCTCCGACCAAGGATCGTACTCTGCTGTTTGAGGGCCGCGTGCTGGGGCATACCAGCAACATCATCGGGCGTCAGCCGGTCTTCTCCGGCATGCGTACCGTAAGCGTAGGCAAGGAAACCCGAGCCTGCATCGTTGAACTGCGGTCCGAGGACTGGCAGCCGCTTCGCGTCACTGGCGCTGAGTGGTCTGGTCAGGTCTTCATGCCGCGCGCACGAGGGCTGTACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
5e4312df92011b9cb3a79307c201fb500f753038ea4c8780e7b641fc39f48d6a
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3145
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Enhanced Suppression of Stenotrophomonas maltophilia by a Three-Phage Cocktail: Genomic Insights and Kinetic Profiling Whitson,K.L. and Pride,D. — — GenBank