Protein

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Genbank accession
QGF20975.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,76
TSP
Evidence RBPdetect2
Probability 0,83
Protein sequence
MTALDTWFSALDIAPDYNTMHYVAGTGGNQFEFNFTGGYLNKVDIKAYKVKDGTTETVPMTLDFTGTNLVTTSEVVPVGWTCVLYRETPKTVPLISFVDGAMITASNLDRNAKQAIFAVAELIDRFKATNVVADQAVDIANEAKALAGSAVSTANSAKAEVADVRAHALRAADKPIAALPDREARRDGILAFDSGDNPVIVPADWESNTGLALLLADKNDPGRGASRIGWEGSDVGTLLNGLRGMQVERVLGNRVGFANWPQGKMCVHNGKVHMGFNFGRMHGGLSLHAYVTSTEDGRNFATPSLVAAPTATEEATWWGMMSLGDKMVGTVRFRFGGGGETPPMRNVIYESNAAGTVWKPVREIVYKTPAGNDISMMQGGILLSTGEIAFSYQDGAGYIGIIALDPANNYDFRIVQLRDPTNNSVDGLGKAAIQVELNMLRREDTDKILVVSRTQRGDIEKPLIWVLNGDLSSTTGPVETDIPVNVNPVTPVFSPDFKNVLFFYSERYNRPTKKAGLYVAEVPLNDAFTLSWTNVQHKYLMQLSGGPSSKGGVAGVQHAVRRDDKVYVGVATRVNNSDEGSDLLFVTLDYSDKKPAVSPSTGSLGSATVNQDVEISLNKLGDYAPRVRMGGKSIISYDGLGYAYGYNNGNLGYDSWSLYTGHTRPAIKVEASTGNAENERGRTLFQQKPTFTQLATFEMGAWLPAGQTLHLGDKARIRVGGTPTRLGQSFLYYDDTTKELQLGTPTVDSGYTVKFMSAVAQGYIFSRSAGQPGAAVNFTLEDADGNQTTLTAGGGYGTLRVTNKLGIEALRIADNTSAQFASGVAVGSVLMNALPSGTLGMQVYVRNARKLHERTASPQLPGTGTLAYFDGATWLFVSDDTPLQ
Physico‐chemical
properties
protein length:884 AA
molecular weight: 95008,79450 Da
isoelectric point:5,71643
aromaticity:0,08710
hydropathy:-0,20023

Domains

Domains [InterPro]
DC_0245
STR
2–386
DC_0245 DC_2182
IPR005604
ATT
27–133
IPR005604 G3DSA:2.120.10.10
QGF20975.1
1 884
Architecture
STR
ATT
STR
RBD
STR 2-26 | ATT 27-133 | STR 134-570 | RBD 571-884
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QGF20975.1
1 884
Domain Start End Length (AA) Confidence
N-terminal 1 296 296 0,8261
Central domain 297 512 217 0,5659
C-terminal 513 884 371 0,5907
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-296
Central
297-512
C-terminal
513-884

Taxonomy

  Name Taxonomy ID Lineage
Phage Pectobacterium phage MA13
[NCBI] 		2662284 Uroviricota > Caudoviricetes > Autographivirales > Melnykvirinae > Daeravirus
Host Pectobacterium carotovorum
[NCBI] 		554 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Genome Context

Genome Context

Tertiary structure

PDB ID
fbdff13174b8d79391e1d207c06c33f60b86b56c86937b050af929b12bcb678b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6547
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50