Protein

View in Explore
Genbank accession
QIN99000.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 0,82
TF
Evidence RBPdetect
Probability 0,61
TF
Evidence Phold
Probability 1,00
Protein sequence
MADVQTRPDNDIFASSAGTGELLPFGDLARGWGATLGYSEGIPPMEWFNFIGNRTDKGIHYILQQGVDVWVETETYPVGALVKVNADNMLYRCLVQNINMPPSANPTQWRPVLDLTAATAAARQVGKASGNVIQVGAFGLGGNAEVVTNANSIVNDGIYQLPASGTGGPTNGVETEILHINWDEKNASQWGRTKGKRVIAMREKVNNTWGEWSYSYGPDNKPTASELGINQDFIPMDGSDSIRGNLGTVGWLHIARTTSDLLRAANSAGIGTVEYSGNIAGGTAVQELLTSVSVAANSNVITAARWGSVPMSHIQHILTAGGATQINMAVCRPGGIADRRTVALQVDGLNSRVTTTNSFILCENGVRVYSPNNPQPIDTSAGNVRGIRLGARIAAGVSESTFYPGHVMTGWRFGNKKELRGGTYWSAPLQYYINGTWINVSNVS
Physico‐chemical
properties
protein length:444 AA
molecular weight: 47428,57960 Da
isoelectric point:6,32552
aromaticity:0,07883
hydropathy:-0,20158

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage renfri
[NCBI] 		2713315 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIN99000.1 [NCBI]
Genbank nucleotide accession
MT074445 [NCBI]
CDS location
range 32344 -> 33678
strand -
CDS
ATGGCTGATGTACAAACAAGACCCGATAACGACATCTTCGCCAGCTCCGCGGGTACTGGTGAACTGCTGCCGTTCGGTGACCTTGCTCGTGGCTGGGGTGCAACCCTTGGCTACTCTGAAGGTATTCCTCCGATGGAGTGGTTTAACTTTATTGGTAACCGTACTGACAAAGGTATCCACTACATCCTTCAGCAGGGTGTTGATGTATGGGTAGAAACTGAGACCTACCCGGTTGGTGCACTGGTTAAAGTTAACGCCGACAATATGCTGTACCGTTGTCTGGTGCAGAACATTAATATGCCACCGTCTGCTAACCCTACGCAATGGCGCCCTGTACTAGACCTGACTGCAGCAACTGCTGCAGCACGACAGGTTGGTAAGGCCTCTGGTAACGTAATCCAGGTCGGTGCATTTGGTTTAGGTGGCAACGCTGAGGTAGTTACTAATGCCAACAGCATTGTAAACGACGGTATCTACCAGCTTCCAGCGTCAGGTACGGGCGGACCTACTAACGGCGTTGAGACTGAGATTCTGCATATCAACTGGGATGAGAAAAACGCTTCACAGTGGGGACGCACCAAGGGTAAGCGCGTAATAGCCATGCGCGAGAAGGTTAACAATACCTGGGGCGAATGGTCATACTCTTACGGGCCTGACAATAAGCCTACTGCCTCTGAGCTGGGTATTAATCAGGACTTCATCCCTATGGATGGTTCTGACTCAATCCGCGGCAACTTAGGTACTGTTGGCTGGCTGCATATTGCACGTACTACTTCCGACTTGCTACGCGCTGCTAACTCCGCCGGCATAGGTACTGTTGAGTACTCCGGTAACATTGCAGGCGGTACTGCTGTTCAGGAGCTGCTGACTTCGGTTTCTGTTGCGGCTAACAGTAATGTTATCACTGCGGCTCGCTGGGGTTCTGTGCCTATGTCACATATCCAGCACATTCTTACGGCAGGTGGTGCCACCCAGATTAACATGGCAGTGTGTCGCCCTGGCGGTATTGCCGACCGTCGTACAGTAGCTTTGCAGGTAGATGGTCTTAATAGCCGAGTAACTACCACAAATAGCTTTATTTTATGCGAGAATGGTGTTAGAGTATATTCACCTAACAACCCGCAGCCTATCGATACTTCAGCCGGTAACGTTCGGGGTATTCGACTCGGCGCTCGTATTGCTGCTGGTGTATCCGAGTCAACGTTCTACCCTGGGCATGTAATGACTGGCTGGCGCTTCGGCAATAAGAAAGAGCTGCGCGGTGGTACATACTGGTCAGCGCCGTTACAGTATTATATCAACGGCACTTGGATTAACGTAAGCAACGTATCGTAA

Tertiary structure

PDB ID
6d4a1f162ea66e698b14a3befd21f7c2777417a3f33ab2c5607a964099cfd775
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6735
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A New High-Throughput Screening Method for Phages: Enabling Crude Isolation and Fast Identification of Diverse Phages with Therapeutic Potential Olsen,N.S., Hendriksen,N.B., Hansen,L.H. and Kot,W. 2020 — GenBank