Protein

View in Explore
Genbank accession
QTJ63420.1 [GenBank]
Protein name
receptor-binding tail protein
RBP type
TSP
Evidence DepoScope
Probability 0,97
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MSFFAGKFSDGKTVLSLNAANGGDINQHYSPNTNSIFHSDMPFVLVDGTYEAALGNAGNGYFVCQMPWDIINIKSNDPGRVILTAVEINGTHRGFLNGTQSQVGSYLTLAEDPGFRAFAQVGLSSAFAIGDSLAHGTYTYNSGLGHEESIARQGTGGTIIQSSDVGIVRPGGVPVGEAVARAYEMLGFPRGTINVPINAGDLNYWDPNWQAPIGSAGRGHDHFYVCSSNIRSYIGKKKEIPANVNQIYSSPTFPYLYTCRGSASNMGSQSVNTVYIQDWYNITPTKVIWYVLNLRYSNGNMVVSGNPFTGSDILISPSNFTIKGVSLPNSGYKFINQNAFGNLGYRPDMEYIGNNAAYTGVFGDTTARCEFIGSSNGGLWSPVNYGGAASQISLYKFGAGKQWYVDTNSNSIGNEHGPVWSPSTVPLRLFPGNVASTYVGDDINPSYPAAGNYYQPLATVWLGLPNAHSTIILTTEIIMGNINTAGMPVRTYGGSAWQVQGRRQQSYTAGDGIFHQILTLPPGYLVPYHSTTAYSYIQEWASRPDSMIFRRNGYIYTIKNLGNGNVELGVIIHAAEAAAIFLPRLRVTVQRLT
Physico‐chemical
properties
protein length:593 AA
molecular weight: 64147,99700 Da
isoelectric point:6,86134
aromaticity:0,11973
hydropathy:-0,16138

Domains

Domains [InterPro]
IPR059609
RBD
1–593
IPR059609
QTJ63420.1
1 593
Architecture
RBD
RBD 1-593
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QTJ63420.1
1 593
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,3488
Central domain 11 258 249 0,8246
C-terminal 259 593 334 0,6206
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-258
C-terminal
259-593

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage STWB21
[NCBI] 		2815768 Uroviricota > Caudoviricetes > Demerecviridae > Epseptimavirus > Epseptimavirus STWB21
Host Salmonella enterica subsp. enterica serovar Typhi
[NCBI] 		90370 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Salmonella

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QTJ63420.1 [NCBI]
Genbank nucleotide accession
MW567727 [NCBI]
CDS location
range 70409 -> 72190
strand +
CDS
ATGAGTTTTTTCGCAGGAAAATTTAGTGATGGTAAAACTGTATTATCTCTAAACGCTGCTAATGGTGGTGATATAAATCAGCACTACTCTCCAAATACTAATAGTATCTTCCACTCAGATATGCCCTTCGTCCTAGTTGATGGGACTTACGAGGCTGCCCTAGGTAATGCTGGTAATGGGTATTTTGTATGTCAGATGCCCTGGGATATTATAAATATTAAATCCAATGATCCTGGTAGAGTTATATTAACTGCTGTTGAGATAAATGGTACTCATAGAGGTTTCCTTAATGGTACACAATCTCAGGTTGGTAGCTACTTAACTCTTGCAGAGGATCCAGGTTTTAGAGCATTCGCTCAAGTAGGTTTAAGTTCTGCTTTTGCAATTGGGGATAGCCTAGCACATGGTACTTATACCTACAATAGTGGACTAGGACATGAAGAATCTATTGCCAGACAAGGTACTGGTGGAACAATTATACAGTCATCAGATGTGGGTATAGTGAGACCTGGTGGTGTTCCGGTAGGAGAAGCTGTTGCCAGAGCATATGAAATGCTTGGATTTCCTAGAGGAACTATTAATGTACCTATAAATGCTGGAGATCTAAACTATTGGGATCCTAACTGGCAGGCACCCATTGGTTCTGCTGGTAGAGGTCACGACCACTTCTATGTATGTAGCTCAAATATTCGTAGCTATATAGGGAAGAAGAAAGAAATACCGGCAAATGTAAATCAGATTTATTCTTCCCCTACATTTCCCTATCTATATACTTGCAGAGGCTCGGCTAGTAATATGGGATCTCAGTCGGTTAATACTGTTTATATTCAGGACTGGTATAATATTACCCCTACTAAGGTTATCTGGTATGTTTTAAATTTACGTTACTCTAATGGTAATATGGTAGTTTCTGGTAATCCATTTACTGGTTCTGATATCCTTATCTCTCCATCTAACTTTACTATTAAAGGAGTAAGTTTACCTAACTCTGGTTATAAATTTATTAATCAGAATGCTTTTGGTAACCTAGGTTATCGTCCAGATATGGAGTATATAGGTAATAATGCTGCGTATACAGGAGTTTTTGGGGATACTACTGCACGGTGTGAGTTCATTGGTTCTAGTAATGGTGGATTATGGTCCCCAGTTAACTATGGTGGTGCTGCATCTCAAATTAGCTTATATAAGTTTGGTGCTGGTAAACAATGGTATGTAGATACTAATAGTAATTCCATAGGAAATGAACATGGTCCAGTTTGGAGTCCTTCTACAGTTCCACTACGATTATTCCCCGGTAACGTTGCTAGTACCTATGTTGGCGATGATATAAATCCCTCTTATCCCGCAGCGGGCAATTATTATCAGCCTTTAGCTACTGTATGGTTGGGTCTACCTAATGCTCACTCTACTATTATATTAACTACAGAAATTATTATGGGTAATATTAATACTGCGGGAATGCCTGTACGTACTTATGGGGGTAGTGCTTGGCAAGTACAAGGTAGACGTCAGCAAAGTTATACTGCTGGTGATGGTATATTTCATCAAATACTAACATTACCACCAGGGTACCTAGTACCTTACCATAGTACTACAGCATACAGTTATATCCAAGAATGGGCGAGCCGACCTGATAGTATGATTTTTAGAAGGAATGGTTATATTTATACTATTAAAAACCTTGGTAATGGTAATGTTGAGTTAGGTGTTATAATTCATGCTGCGGAAGCAGCTGCTATCTTCTTACCAAGACTACGTGTAACAGTTCAACGCCTAACCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
6c968a03d155b38ed2044eebe965372daa3ca970fb218c5bf4894e4381fee0f0
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,2516
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50