Protein

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Genbank accession
YP_001522826.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,72
Protein sequence
MSYKQSAYPNLLMGVSQQVAFERLPGQLSEQINMVSDPVSGLRRRSGIELMASLLHTDQPWPRPYLYHTNLGGRSIAMLVAQHRGELYLFDEKDGRLLMGQPLVHDYLKASDYRQLRAATVADDLFIANLEVRPEADKADVLGVDPSKTGWLYIKAGQYSKAFSLTIKVKDNATGTTYSHTATYVTPDNASTNPNLAEAPFQTSVGYIAWQLFGKFFGAPEYTLPNSTKKYPKVDPDPAAATVAGYLNQRGVQDGYIAFRGDGDIVVEVSTDMGNNYGIASGGMSLNATADLPALLPGAGTPGTGVQFMDGAIMATGSTKAPVYFAWDAANRRWAERAAYGTDWVLKKMPLALRWDESTDTYSLNELEYDRRGSGDEETNPTFNFVKRGITGMTTFQGRLVLLSQEYVCMSASNNPHRWFKKSAAALNDDDPIEIAAQGSLTEPYEHAVTFNKDLIVFAKKYQAVVPGGGIVTPRTAVISITTQYDVDTRAAPAVTGRSVYFAAERALGFMGLHEMAPSPSTDSHYVAEDVTSHIPSYMPGPAEYIQAAASSGYLVFGTSAADEMICHQYLWQGNEKVQNAYHRWTLRHQIIGAYFTGDNLMVLIQKGQEIALGRMHLNSLPAREGLQYPKYDYWRRIEATVDGELELTKQHWDLIKDGAAVYQLQPQVGAYMERYQLGVKRETSTKVFLDVPEAVVGSVYVVGCEFWSKVEFTPPVLRDHNGLPMTSTRAVLHRYNVNFGWTGEFLWRISDTARPNQPWYDTTPLRLSSRQLNAGEPLVDSAVVPLPARVDMATSKFELSCHSPYDMNVRAVEYNFKSNQTYRRV
Physico‐chemical
properties
protein length:826 AA
molecular weight: 91782,47100 Da
isoelectric point:5,95311
aromaticity:0,10775
hydropathy:-0,32421

Domains

Domains [InterPro]
IPR058003
TTP
1–817
IPR058003
DC_0058
STR
1–826
DC_0058
YP_001522826.1
1 826
Architecture
STR
STR 1-826
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_001522826.1
1 826
Domain Start End Length (AA) Confidence
N-terminal 1 144 144 0,9910
Central domain 145 352 209 0,2039
C-terminal 353 826 473 0,3076
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-144
Central
145-352
C-terminal
353-826

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage LKD16
[NCBI] 		386792 Uroviricota > Caudoviricetes > Autographivirales > Krylovirinae > Phikmvvirus
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales
Host Pseudomonas aeruginosa PAO1
[NCBI] 		208964 Bacteria > Proteobacteria > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_001522826.1 [NCBI]
Genbank nucleotide accession
NC_009935 [NCBI]
CDS location
range 26435 -> 28915
strand +
CDS
ATGAGCTACAAGCAATCAGCCTACCCTAACCTCCTGATGGGGGTCAGCCAGCAGGTAGCCTTCGAGCGCCTGCCCGGTCAGCTCAGCGAGCAGATCAACATGGTGTCGGACCCGGTGTCGGGCCTCCGGCGCCGCAGCGGTATCGAGCTGATGGCCAGCCTGCTGCATACGGACCAACCCTGGCCCAGGCCCTACCTGTACCATACGAACCTCGGTGGCCGCAGCATTGCGATGCTGGTGGCACAGCACCGAGGCGAGCTGTACCTCTTCGACGAGAAGGATGGTCGGCTCCTGATGGGCCAGCCGCTGGTGCATGACTACCTCAAAGCCTCGGACTACAGGCAGCTCCGCGCCGCCACCGTGGCGGATGACCTGTTCATCGCCAACCTGGAGGTCCGGCCAGAGGCGGACAAGGCTGACGTGCTCGGCGTCGATCCAAGCAAGACCGGCTGGCTGTATATAAAGGCGGGTCAATACTCGAAGGCGTTCTCCCTGACCATCAAGGTCAAGGACAACGCCACCGGCACGACCTACAGCCACACGGCCACCTACGTGACACCGGACAATGCCAGCACCAACCCCAATCTCGCCGAGGCGCCGTTCCAGACGAGCGTGGGCTACATCGCATGGCAGTTGTTCGGCAAATTCTTCGGCGCTCCAGAGTACACCCTACCCAACTCCACGAAGAAGTACCCGAAGGTTGACCCCGACCCGGCTGCGGCTACGGTAGCCGGCTATCTCAACCAGCGGGGCGTGCAGGACGGCTACATCGCCTTCCGGGGCGACGGAGACATCGTGGTCGAGGTGTCTACGGATATGGGCAACAACTACGGCATCGCCTCGGGTGGTATGAGCCTCAACGCCACGGCGGACCTGCCTGCGCTGCTCCCTGGTGCAGGCACCCCCGGCACCGGCGTCCAGTTCATGGACGGGGCCATCATGGCCACCGGCTCCACCAAGGCCCCCGTGTACTTCGCCTGGGACGCCGCCAATCGGCGGTGGGCTGAGCGGGCTGCATATGGCACCGATTGGGTGCTGAAGAAGATGCCCTTGGCTCTGCGCTGGGACGAATCGACCGACACTTACAGCCTCAACGAGCTGGAGTATGACCGGCGCGGTTCCGGGGACGAGGAGACGAACCCCACCTTCAACTTCGTGAAGCGGGGCATCACTGGCATGACGACCTTCCAGGGTCGCCTCGTCCTCCTGTCGCAGGAGTACGTGTGCATGTCGGCGAGCAACAACCCGCACCGCTGGTTCAAGAAGTCGGCAGCCGCCCTCAACGACGACGACCCCATCGAGATCGCCGCCCAGGGGTCCCTGACCGAGCCATACGAGCACGCCGTCACGTTCAATAAGGACTTGATCGTCTTCGCCAAGAAGTATCAGGCCGTGGTCCCTGGTGGCGGTATCGTGACGCCGAGGACGGCAGTCATCAGCATCACCACGCAGTACGACGTGGACACCCGAGCGGCCCCCGCCGTAACCGGGCGGTCCGTGTACTTCGCCGCCGAGCGTGCCTTGGGTTTCATGGGGCTGCACGAGATGGCGCCGTCGCCGTCCACTGACAGCCACTATGTCGCTGAGGACGTGACCAGCCACATCCCGAGCTACATGCCGGGGCCGGCTGAGTACATCCAGGCGGCGGCCTCCAGTGGCTACCTAGTGTTCGGCACAAGTGCCGCCGACGAGATGATTTGCCATCAGTACCTCTGGCAGGGCAACGAGAAGGTGCAGAACGCCTACCACCGCTGGACGCTACGGCACCAGATCATAGGCGCGTACTTTACCGGCGATAACCTGATGGTACTGATTCAGAAGGGCCAGGAGATCGCGCTGGGTCGGATGCACCTCAACAGCCTGCCGGCCCGTGAGGGTCTACAATATCCGAAGTACGACTACTGGCGCCGCATCGAGGCGACCGTGGACGGCGAGCTTGAGCTGACCAAGCAGCATTGGGACCTGATCAAGGATGGCGCCGCAGTGTACCAGCTCCAGCCACAGGTTGGGGCCTACATGGAGCGATACCAGCTCGGCGTGAAGCGCGAGACGAGCACGAAGGTGTTCCTCGACGTGCCCGAGGCTGTGGTGGGTTCGGTGTACGTGGTGGGCTGCGAGTTCTGGTCGAAGGTGGAGTTCACCCCGCCAGTGCTACGGGACCACAACGGCCTGCCCATGACCTCGACCCGCGCAGTGTTGCACCGGTACAACGTCAACTTCGGATGGACGGGCGAGTTCCTGTGGCGCATCAGCGACACGGCGCGGCCCAACCAACCGTGGTACGACACGACCCCCCTGCGACTGTCCAGCCGCCAGCTCAATGCCGGCGAGCCGCTGGTCGATAGCGCGGTGGTGCCGCTGCCGGCTCGGGTGGACATGGCGACCTCGAAGTTCGAGCTGAGCTGCCACAGTCCATACGATATGAACGTCCGGGCCGTCGAGTACAACTTCAAATCCAACCAGACCTACAGGAGGGTGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
6ba1974252e5f16bdd43ed14e6c6d26daf16ec11f7229a852e91814e68aaec72
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8407
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50